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. 2025 Sep 17;15:1653602. doi: 10.3389/fcimb.2025.1653602

Table 1.

The set of primers used for the Mycobacterium tuberculosis complex (MTBC) and nontuberculous mycobacteria (NTM) detection LAMP assay in this study.

Species (target) Primers Sequence (5’ to 3’)
MTBC
(IS6110)
F3 GGTCGGAAGCTCCTATGA
B3 GTTGAGCGTAGTAGGCAG
FIP GGGCTTGCCGGGTTTGATCAATGCACTAGCCGAGAC
BIP GTCCATCGAGGATGTCGAGTTGCCGCAGTACTGGTAGAGG
LF CAGCTCGGTCTTGTATAGGC
LB TGGGTCGACTGGTTCAAC
NTM (16SrRNA) F3 CCGCGGTAATACGTAGGGT
B3 ACCGGTGTTCCTCCTGAT
FIP CGCTCACAGTTAAGCCGTGAGATCCGGAATTACTGGGCGT
BIP GGCGATACGGGCAGACTAGAGTCGCATTCCACCGCTACAC
LF ACAAACCACCTACGAGCTCTT
LB ACTGCAGGGGAGACTGGA
M. intracellulare (MINTM006_47990) F3 TCTTCCGTGGTACGAGAG
B3 TGATACGGAGAAGGGATCG
FIP TGCACATCCTGCGCCAATCCATACATGGCGACCTTG
BIP GTAATCCGGCGTGGCTGTACTCCCACCAATAAGGCA
LF ATGGCGATCGCGATTAGG
LB CCATTCTGCTGGCCATCTC
M. avium
(gyrB)
F3 GCCTGACCATCAACCTCACC
B3 TGGTGGATGGGGTTTTTGG
FIP CTTCTCCTGCGCCGACTTGGCGGGTGACCAACGAAGAG
BIP AATCGGCTGCGCCGCATAAGTTTGACGAAGTCGACCAGG
LF TGTCGCTGACCACCTCG
LB TCAAGCACCGCACCTTC
M. abscessus (erm41) F3 TGCCAGGGTGCTAGCCGTCGA
B3 TGGCGAACAGGTGCTCGCT
FIP GAAATGGCCGTCGCGGTTCGTTCACGGTTTGCCGAG
BIP TGGTGGCGAGCCCACCAGGTCGGCAGCCA
LF GCGAGCAGGTCCGCTTCCGCTAT
LB ACCAAGTCACCAGCGCA
M. kansasii(hypothetical protein B1T47_13295) F3 CCCGGTCCACTATTACGACA
B3 CAGTGTCAGTGCAAGATCGA
FIP GGAACCGTTGATCGGTTGCCGTTCAGAATCGACCGCATGG
BIP CGCCAACATGGCAATCCGGACGGTCTTCCAGATCCAGCT
LF TGCGATGCAGGTTGCGG
LB GGCAGGCGGTACGTCAT
M. gordonae
(ITS)
F3 CCCTTAGACACTTACAAACACT
B3 TAAGGAGCACCACGAAGA
FIP CCTCCATCTTGGTGGTGGGCGAACGACAACGCATACA
BIP GTGTTGCCTCAGGACCCAATTCTGTAGTGGACGAAGACC
LF AGTGGTTGCGAGCATCAA
LB GCTTTGCCTGTTGTCGTG
M. fortuitum
(dnaA)
F3 GATCGTGATTCCAACAGTGA
B3 AGTCCTCGGATTCCTCTG
FIP GAGAGCAGAGCAAACCCCTCCACTGACTCCTCAGCAAAG
BIP GTTCCCACCCCGTTCGTCCTGAGCGCGTTGATGATC
LF TTCACCAGCTTGAGCCAG
LB GAGATCGAACGGCACCTC