TABLE 3.
Results of the genotyping analysis for S. aureus by PamChip microarray
| Strain | Mutation ina:
|
mecA resultb | |||||
|---|---|---|---|---|---|---|---|
|
grlA codon(s) (product[s]):
|
grlB codon 451 (P) (product) |
gyrA codon(s) (product[s]):
|
|||||
| 47 (Y) | 79 (D) 80 (S) | 84 (E) | 84 (S) 85 (S) | 88 (E) | |||
| MRSA | |||||||
| HU2000- | |||||||
| 62S | TAT(Si) | GAC(Wt)TTC(F) | AAA(K) | CCA(Wt) | TTA(L)CCT(P) | GAA(Wt) | P |
| 63S | TAT(Si) | GAC(Wt)TAC(Y) | AAA(K) | CCA(Wt) | TTA(L)TCT(Wt) | GAA(Wt) | P |
| 64 | TAT(Si) | GAC(Wt)TAC(Y) | GAA(Wt) | CCA(Wt) | TTA(L)TCT(Wt) | GAA(Wt) | P |
| 86S | TAT(Si) | GAC(Wt)TTC(F) | GAA(Wt) | CCA(Wt) | TCA(Wt)TCT(Wt) | AAC(K) | P |
| 91S | TAT(Si) | GAC(Wt)TTC(F) | GAA(Wt) | CCA(Wt) | TCA(Wt)TCT(Wt) | AAC(K) | P |
| 92 | TAT(Si) | GAC(Wt)TTC(F) | GAA(Wt) | CCA(Wt) | TCA(Wt)TCT(Wt) | AAC(K) | P |
| 120 | TAT(Si) | GAC(Wt)TAC(Y) | GAA(Wt) | CCA(Wt) | TTA(L)TCT(Wt) | GAA(Wt) | P |
| 129 | TAT(Si) | GAC(Wt)TTC(F) | GAA(Wt) | TCA(S) | TTA(L)TCT(Wt) | GAA(Wt) | P |
| 133 | TAT(Si) | GAC(Wt)TAC(Y) | GAA(Wt) | CCA(Wt) | TTA(L)TCT(Wt) | GAA(Wt) | P |
| 134 | TAT(Si) | GAC(Wt)TAC(Y) | GAA(Wt) | CCA(Wt) | TTA(L)TCT(Wt) | GAA(Wt) | P |
| 135 | TAT(Si) | GAC(Wt)TTC(F) | GAA(Wt) | CCA(Wt) | TCA(Wt)TCT(Wt) | AAC(K) | P |
| 136 | TAT(Si) | GAC(Wt)TAC(Y) | GAA(Wt) | CCA(Wt) | TTA(L)TCT(Wt) | GAA(Wt) | P |
| 156 | TAT(Si) | GAC(Wt)TTC(F) | GAA(Wt) | TCA(S) | TTA(L)TCT(Wt) | GAA(Wt) | P |
| 177 | TAT(Si) | GAC(Wt)TTC(F) | GAA(Wt) | CCA(Wt) | TCA(Wt)TCT(Wt) | AAC(K) | P |
| 178 | TAT(Si) | GAC(Wt)TTC(F) | GAA(Wt) | TCA(S) | TTA(L)TCT(Wt) | GAA(Wt) | P |
| 199 | TAT(Si) | GAC(Wt)TTC(F) | GAA(Wt) | CCA(Wt) | TCA(Wt)TCT(Wt) | AAC(K) | P |
| 214 | TAT(Si) | GAC(Wt)TTC(F) | GAA(Wt) | CCA(Wt) | TCA(Wt)TCT(Wt) | AAC(K) | P |
| 228 | TAT(Si) | GAC(Wt)TTC(F) | GAA(Wt) | TCA(S) | TTA(L)TCT(Wt) | GAA(Wt) | P |
| 240 | TAT(Si) | GAC(Wt)TAC(Y) | AAA(K) | CCA(Wt) | TTA(L)TCT(Wt) | GAA(Wt) | P |
| SHH- | |||||||
| 41 | TAT(Si) | GAC(Wt)TTC(F) | GAA(Wt) | TCA(S) | TTA(L)TCT(Wt) | GAA(Wt) | P |
| 43 | TAT(Si) | GAC(Wt)TAC(Y) | GAA(Wt) | CCA(Wt) | TTA(L)TCT(Wt) | GAA(Wt) | P |
| 44 | TAT(Si) | GAC(Wt)TTC(F) | GAA(Wt) | TCA(S) | TTA(L)TCT(Wt) | GAA(Wt) | P |
| 45 | TAT(Si) | GAC(Wt)TTC(F) | GAA(Wt) | TCA(S) | TTA(L)TCT(Wt) | GAA(Wt) | P |
| 46 | TAT(Si) | GAC(Wt)TAC(Y) | GAA(Wt) | CCA(Wt) | TTA(L)TCT(Wt) | GAA(Wt) | P |
| MSSA | |||||||
| RN4220 | TAT(Si) | GAC(Wt)TCC(Wt) | GAA(Wt) | CCA(Wt) | TCA(Wt)TCT(Wt) | GAA(Wt) | N |
| Taku | TAT(Si) | GAC(Wt)TCC(Wt) | GAA(Wt) | CCA(Wt) | TCA(Wt)TCT(Wt) | GAA(Wt) | N |
| NCTC8325 | TAT(Si) | GAC(Wt)TCC(Wt) | GAA(Wt) | CCA(Wt) | TCA(Wt)TCT(Wt) | GAA(Wt) | N |
a
D, Asp; E, Glu; F, Phe; K, Lys; L, Leu; P, Pro; S, Ser; Y, Tyr.
b
P, positive; N, negative.