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. 2005 Oct;43(10):5281–5284. doi: 10.1128/JCM.43.10.5281-5284.2005

TABLE 1.

VNTR profiles of M. ulcerans and M. marinum

Species Isolatesa Origin VNTR allelic profile (by locus no.)
VNTR/MLST/IS2404-RFLPb type MIRUc-VNTR type
1 4 6 8 9 14 15 18 19
M. ulcerans ITM 94-1324 Australia 1 2 1 3 3 1 1 1 2 Southeast Asian Asian
ITM 94-1328 Malaysia 1 2 1 3 3 1 1 1 2 Southeast Asian Asian
ITM 94-1331 Papua New Guinea 1 2 1 3 3 1 1 1 2 Southeast Asian Asian
ITM 98-912 China 1 2 2 3 4 3 1 2 4 Asian Asian
ITM 8756 Japan 1 2 2 3 4 3 1 2 4 Asian Asian
ITM 97-658 Angola 1 1 1 3 2 1 1 1 2 African African
ITM 97-104 Benin 1 1 1 3 2 1 1 1 2 African African
Sequence strain Ghana 1 1 1 3 2 1 1 1 2 African African
ITM 842 Surinam 2 1 1 1 2 2 2 1 3
M. marinum Sequence strain 5 4 5 2 3 4 3 2 9
a

The profile of the Surinam type was included to indicate polymorphism, at loci 1, 8, and 15. ITM, Institute of Tropical Medicine.

b

MLST, multilocus sequence typing (15); RFLP, restriction fragment length polymorphism (5).

c

MIRU, mycobacterial interspersed repetitive unit (16).