TABLE 2.
Strains | Year isolated | Sources (nonhuman) | MIC (μg/ml)a
|
Mutations in QRDRs
|
Genotype
|
R-type | PCR for resistance genes or contigs
|
|||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NA | CI | NX | GyrA | GyrB | ParC | ParE | BlnI | XbaI | DT | blaoxa30aadA1 | dhfr12-aadA2 | aac3 | catA | tetRA | ||||
Human isolate | ||||||||||||||||||
1 | 2002 | >256 | 24 | 32 | S83F + D87N | S80R | Aa | Aa | 193 | ACSSuTNCp + SxTpG | + | + | + | + | + | |||
2 | 2001 | >256 | 24 | 32 | S83F + D87N | S80R | Ab | Aa | 12 | ACSSuTNCp | + | − | − | + | + | |||
3 | 2001 | >256 | 24 | 32 | S83F + D87N | S80R | Ab | Aa | 12 | ACSSuTNCp | + | − | − | + | + | |||
4 | 2001 | >256 | 32 | 32 | S83F + D87N | S80R | Ab | Aa | 12 | ACSSuTNCp | + | − | − | + | + | |||
5 | 2002 | >256 | 32 | 48 | S83F + D87N | S80R | Ac | Ab | 12 | ACSSuTNCp | + | − | − | + | + | |||
6 | 2002 | >256 | 24 | 32 | S83F + D87N | S80R | Aa | Aa | 193 | ACSSuTNCp + SxTpG | + | + | + | + | + | |||
7 | 2003 | >256 | 32 | 32 | S83F + D87N | S80R | Aa | Aa | 193 | ACSSuTNCp + SxTpG | + | + | + | + | + | |||
8 | 2003 | >256 | >32 | >256 | S83F + D87G | S80R | S458P | B | Ac | 193 | ACSSuTNCp + SxTpG | + | + | + | + | + | ||
9 | 2001 | >256 | 24 | 32 | S83F + D87N | S80R | Aa | Aa | 193 | ACSSuTNCp + SxTpG | + | + | + | + | + | |||
10 | 2002 | >256 | 32 | 48 | S83F + D87N | S80R | Aa | Aa | 193 | ACSSuTNCp + SxTpG | + | + | + | + | + | |||
11 | 2002 | >256 | 32 | 48 | S83F + D87N | S80R | Aa | Aa | 193 | ACSSuTNCp + SxTpG | + | + | + | + | + | |||
12 | 2003 | >256 | 24 | 32 | S83F + D87N | S80R | Aa | Aa | 193 | ACSSuTNCp + SxTpG | + | + | + | + | + | |||
0b | 2000 | >256 | 24 | 32 | S83F + D87N | S80R | Aa | Aa | 12 | ACSSuTNCp + SxTpG | + | + | + | + | + | |||
Nonhuman isolate | ||||||||||||||||||
101 | 2001 | Cattle | >256 | 24 | 32 | S83F + D87N | S80R | Aa | Aa | 12 | ACSSuTNCp + SxTpG | + | + | + | + | + | ||
102c | 2001 | Dog | >256 | 24 | 24 | S83F + D87N | S80R | Ab | Aa | 12 | ACSSuTNCp | + | − | − | + | + | ||
103c | 2001 | Cat | >256 | 24 | 32 | S83F + D87N | S80R | Ab | Aa | 12 | ACSSuTNCp | + | − | − | + | + | ||
104 | 2001 | Dog | >256 | 24 | 32 | S83F + D87N | S80R | Aa | Aa | 12 | ACSSuTNCp + SxTpG | + | + | + | + | + | ||
105 | 2003 | NAd | >256 | 24 | 24 | S83F + D87N | S80R | Aa | Aa | 193 | ACSSuTNCp + SxTpG | + | + | + | + | + | ||
100 | 1997 | Cattle | >256 | 0.75 | 3 | S83F | S80R | Ab | B | 193 | ACSSuTN | + | − | − | + | + |
Determined by E-test. NA, nalidixic acid; CI, ciprofloxacin; NX, norfloxacin.
The first isolate in reference 13.
Associated with cases human isolates no. 2 and 4, respectively.
NA, not available