Table 6.
Association between Genotypes of Tumor Suppressor TP53 and TP21 Genes with Tumor and Node Response in Head and Neck Cancer Patients towards Radiotherapy
| Gene Name (SNP) |
Genotype | Tumor Response | Risk Ratio (RR) 95% CI |
p value | Node Response | Risk Ratio (RR) 95% CI |
p value | ||
|---|---|---|---|---|---|---|---|---|---|
| CR | PR/NR | CR | PR/NR | ||||||
| n=209 | n=41 | n=217 | n=33 | ||||||
|
TP53
G72C (rs1042522) |
G/G | 108 | 25 | 1 (Reference) | 113 | 20 | 1(Reference) | ||
| G/C | 61 | 9 | 0.63 (0.27-1.45) | 0.284 | 61 | 9 | 0.83 (0.35-1.94) | 0.673 | |
| C/C | 40 | 7 | 0.75 (0.30-1.88) | 0.548 | 43 | 4 | 0.52 (0.16-1.62) | 0.264 | |
| G/C+ C/C | 101 | 16 | 0.68 (0.34-1.35) | 0.276 | 104 | 13 | 0.70 (0.33-1.49) | 0.361 | |
|
TP53
G249T (rs28934571) |
G/G | 130 | 27 | 1 (Reference) | 134 | 23 | 1(Reference) | ||
| G/T | 41 | 9 | 1.05 (0.45-2.42) | 0.896 | 43 | 7 | 0.94 (0.38-2.36) | 0.909 | |
| T/T | 38 | 5 | 0.59 (0.18-1.94) | 0.394 | 40 | 3 | 0.43 (0.12-1.53) | 0.195 | |
| G/T+ T/T | 79 | 14 | 0.80 (0.32-2.02) | 0.647 | 83 | 10 | 0.70 (0.31-1.54) | 0.38 | |
|
TP21
C98A (rs1801270) |
C/C | 166 | 30 | 1 (Reference) | 174 | 22 | 1(Reference) | ||
| C/A | 41 | 11 | 1.48 (0.68-3.20) | 0.315 | 42 | 10 | 1.88 (0.82-4.27) | 0.13 | |
| A/A | 2 | 0 | 1.09 (0.05-23.30) | 0.955 | 1 | 1 | 7.90 (0.47-130.99) | 0.148 | |
| C/A+ A/A | 43 | 11 | 1.41 (0.65-3.05) | 0.375 | 43 | 11 | 2.02 (0.91-4.48) | 0.083 | |
|
TP21
C70T (rs1059234) |
C/C | 157 | 25 | 1 (Reference) | 162 | 20 | 1 (Reference) | ||
| C/T | 43 | 15 | 2.19 (1.06-4.51) | 0.033* | 48 | 10 | 1.68 (0.732-3.84) | 0.213 | |
| T/T | 9 | 1 | 0.69 (0.08-5.74) | 0.738 | 7 | 3 | 3.47 (0.83-14.50) | 0.088 | |
| C/T+ T/T | 52 | 16 | 1.93 (0.95-3.89) | 0.065 | 55 | 13 | 1.91 (0.89-4.10) | 0.094 | |
RS, Radiosensitive; SNP, Single nucleotide polymorphism; CR, Complete Response; PR, Partial Response; NR, No Response; RR, Risk ratio; CI, Confidence interval; Significance p< 0.05; *, Indicates significant Odds Ratio (p<0.05); p value determined based on χ2