TABLE 2.
Parameter or change from Ori-3 | Operator sequence | SF
|
|
---|---|---|---|
CNU | Hha | ||
Position | 1 5 1015 202530 | ||
Ori-3 | 5′-CCC-GATC ATTAACTGTGAATGATCGGTGATCCTG - GGG -3′ | 0.54 | 0.58 |
5′ 2-bp deletion | TCATTAACTGTGAATGATCGGTGATCCTG | 0.56 | 0.59 |
5′ 3-bp deletion | CATTAACTGTGAATGATCGGTGATCCTG | 0.50 | 0.57 |
5′ 4-bp deletion | ATTAACTGTGAATGATCGGTGATCCTG | 0.50 | 0.51 |
5′ 5-bp deletion | TTAACTGTGAATGATCGGTGATCCTG | 0 | 0 |
5′ 10-bp deletion | TGTGAATGATCGGTGATCCTG | 0 | 0 |
5′ 2-bp addition | AGGAT CATTAACTGTGAATGATCGGTGATCCTG | 0.52 | 0.54 |
3′ 2-bp deletiona | GAT CATTAACTGTGAATGATCGGTGATCC | 0 | 0 |
T to A at position 30 | GAT CATTAACTGTGAATGATCGGTGATCCAG | 0 | 0 |
T to C at position 30 | GAT CATTAACTGTGAATGATCGGTGATCCCG | 0 | 0 |
A to G at position 19 | GAT CATTAACTGTGAATGGTCGGTGATCCTG | 0.49 | 0.57 |
3′ 10-bp deletionb | GAT CATTAACTGTGAATGATC | 0 | 0 |
cnb | ATTAACTGTGAATGATCGGTGATCCT |
This deletion results in the same DNA sequence as a change from T to G at position 30 due to the GGG sequence of the vector at the 3′ end of Ori-3.
Sequence contains only the inverted repeat.