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. 2005 Oct;187(20):7119–7125. doi: 10.1128/JB.187.20.7119-7125.2005

TABLE 1.

Activity, autoprocessing, CD spectroscopy, and MALLS analysis on GPR variantsa

GPR Result for:
P41
P46
SASP assayb Folded by CDc MALLS (T:D:M)d Autoprocessinge Folded by CD MALLS (T:D:M)
Wild type Active Folded 60:0:0 Active Folded 90:0:0
Inactive single variants
    D127A Inactive Folded 80:0:0 Inactive Folded 100:0:0
    D127E Inactive Folded 80:0:0 Inactive Folded 100:0:0
    D127N Inactive Folded 0:40:0 Inactive Folded 90:0:0
    D127S Inactive Folded 0:20:0 Inactive Folded 90:0:0
    D193N Inactive Folded 80:0:0 Inactive Folded 90:0:0
Active single variants
    Group Ag Active NDf ND Active Folded ND
    Group Bh Active Folded ND Active Folded ND
    S199A Active Folded 10:30:10 Inactive Folded 80:0:0
    R202Q Active Folded ND Active Folded 90:0:0
    D246N Partially active Folded Aggregatedi Inactive Folded Aggregated
    S249A Partially active Folded Aggregated Inactive Folded Aggregated
Deletion variants
    Δ223 Active Folded ND Active Folded ND
    Δ213-226 Inactive Misfolded Aggregated Inactive/inactive Misfolded Aggregated
    Δ213-227 Inactive Misfolded Aggregated Inactive/inactive Misfolded Aggregated
    Δ214-226 Inactive Misfolded ND Inactive/inactive Misfolded ND
    Δ214-227 Inactive Misfolded ND Inactive/inactive Misfolded ND
a

Assays of activity, autoprocessing, CD spectroscopy, and MALLS on wild-type P41 and P46 and all variants were done as described in Materials and Methods.

b

Active, no significant difference (± 20%) in activity relative to that of wild-type P41. Inactive, at least 80-fold less active than wild-type P41. Partially active, ≈50% activity relative to that of wild-type P41.

c

Folded, no significant difference between a variant's CD spectrum and that of the corresponding wild-type GPR (P41 or P46) (see Fig. 3). Misfolded, significant difference between a variant's CD spectrum and that of wild-type GPR.

d

Data are reported as ratios of the percent tetramer (T) to dimer (D) to monomer (M). These values may not add up to 100% because most proteins did not completely give well-defined populations of homogeneous particle size. (See Fig. 4.)

e

Active, generation of P41 after overnight incubation under autoprocessing conditions. Inactive, no P41 generated. Wild-type P46 typically autoprocesses to 50% completion overnight, and the sensitivity of this assay allows detection of ≈3% autoprocessing. Inactive/inactive, P46 variant was unable to autoprocess to P41 and was inactive against SASP as P46.

f

ND, not done.

g

D256N, E26Q, E89Q, H215Q, K21P, Q208E, S212A, S218A, T74D, T215V, and Y72F.

h

D153N, D211N, D253N, E201Q, H142Q, K223A, K223E, K223H, K223M, S210A, R224Q, T125N, and T173V.

i

Aggregated, MALLS analysis yielded only high-molecular-weight species with no detectable tetramer, dimer, or monomer.