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. 2025 Sep 23;15(19):2774. doi: 10.3390/ani15192774
F_PED Pedigree-based inbreeding coefficient (based on recorded ancestry)
ROH Runs of homozygosity (continuous homozygous genomic segments)
F_ROH Inbreeding coefficient estimated from the proportion of the genome covered by ROH
F_HOM SNP-based inbreeding coefficient estimated from observed versus expected homozygosity
F_HBD Inbreeding coefficient estimated based on homozygosity-by-descent using a hidden Markov model
F_GRM Inbreeding coefficient derived from the diagonal of the genomic relationship matrix
GRM Genomic relationship matrix (based on SNP allele sharing between individuals)