AOM/DSS	azoxymethane/dextran sulfate sodium
APC	adenomatous polyposis coli
CAC	colitis-associated cancer
CD	Crohn’s disease
circRNA	circular RNA
CRC	colorectal cancer
CRP	C-reactive protein
EMT	epithelial–mesenchymal transition
GEMM	genetically engineered mouse models
GI	gastrointestinal
GIC	gastrointestinal cancer
GIT	gastrointestinal tract
GITB	gastrointestinal tuberculosis
IBD	inflammatory bowel disease
IECs	intestinal epithelial cells
ILCs	innate lymphoid cells
lincRNA	long intergenic RNA
lncRNA	long non-coding RNA
MTBC	Mycobacterium tuberculosis complex
ncRNA	non-coding RNA
NFκB	nuclear factor-kappa B
piRNA	PIWI-interacting RNA
PDX	patient-derived xenografts
RBP	RNA-binding protein
TB	tuberculosis
TF	transcription factor
TSS	transcription start site
UC	ulcerative colitis