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. 2025 Sep 17;14(9):4095–4111. doi: 10.21037/tlcr-2025-325

Table 3. Metabolomics of fluid-based biomarkers for lung cancer beyond blood.

Biomarkers Sample Method Group (N) Performance Confounding factors Reference
2 metabolites model: creatine riboside(↑), N-acetylneuraminic(↑) Urine LC-MS Discovery set: NSCLC =469; Healthy =536. Validation set: NSCLC =80; Healthy =78 CREATINE riboside: P<0.00001***; N-acetylneuraminic acid: P<0.00001***; creatine riboside: P<0.00001***; N-acetylneuraminic acid: P<0.00001*** Age, gender, ethnicity (matched), smoking status (adjusted) (45)
Carnitine(↑), acylcarnitines(↓) Urine UHPLC-Q-TOF-MS/MS NSCLC =20; Healthy =20 AUC =0.958 Age, gender (46)
4 metabolites model: 1-methylhistidine(↑), xanthosine(↓), 8-hydroxynevirapine(↓), tyrosyl-tyrosine(↓) Urine UPLC-Q-TOF/MS Discovery set: NSCLC =30; Healthy =30. Validation set: NSCLC =38; Healthy =42 1-methylhistidine: AUC =0.95; xanthosine: AUC =0.874; 8-hydroxynevirapine: AUC =0.867; tyrosyl-tyrosine: AUC =0.822 Age (matched), gender, smoking status (47)
4-Methoxyphenylacetic acid Urine 1H NMR NSCLC =28; Healthy =17 AUC =0.85 Age (P=0.022*), gender (matched), smoking status (48)
PGE-major urinary metabolite
(PGE-MUM)(↑)
Urine Radioimmunoassay NSCLC =369 Pre-op: P=0.005 (**), HR =3.017 (95% CI: 0.135–24.47); Post-op: P=0.027 (*) (95% CI: 1.284–32.49) Gender (P=0.006**); smoking status (P=0.002**) (49)
2 metabolites model: creatine riboside(↑), N-acetylneuraminic(↑) Urine UPLC-MS/MS LC =178; Healthy =351 Creatine riboside: AUC =0.84; N-acetylneuraminic acid: AUC =0.90 Age, gender, ethnicity (P>0.05); smoking status (P<0.0001***) (50)
Ganglioside GM1 (18:1/12:0) Sputum FIE-MS and GC-MS LC =23; Healthy =33 AUC =0.854 Age, gender, smoking status (51)
ANN model; 6 metabolites model: phenylacetic acid, L-fucose, caprylic acid, acetic acid, propionic acid, and glycine Sputum FIE-MS LC =23; Healthy =33; SCLC =5; NSCLC =17 AUC =0.99, sensitivity 96%, specificity 94%. AUC =1.00, sensitivity 80%, specificity 100% Age (P>0.05), gender (P>0.05) (52)
5 metabolites model: hydroxyphenyllactic acid(↑), phytosphingosine(↑), N-nonanoylglycine(↑), sphinganine(↑), S-carboxymethyl-L-cysteine(↑) Sputum LC-MS LC =76; Healthy =67 Hydroxyphenyllactic acid: P=1.08E−08***; phytosphingosine: P=1.15E−07***; N-nonanoylglycine: P=1.88E−09***; sphinganine: P=1.06E−08***; S-carboxymethyl-L-cysteine: P=8.67E−09*** Age (matched)
gender, smoking status
(53)
4 metabolites model: diethanolamine(↑), cytosine(↓), lysine(↓), tyrosine(↑) Saliva CE-MS LC =41; benign lung lesion = 21 Diethanolamine: AUC =0.612; cytosine: AUC =0.586; lysine: AUC =0.620; tyrosine: AUC =0.618 Age, gender (54)
Glycerol and phosphoric acid BALF DI-ESI-QTOF-MS and GC-MS LC =24; benign lung lesion =31 Glycerol: AUC =0.88, sensitivity 80%, specificity 90%; phosphoric acid: AUC =0.79, sensitivity 80%, specificity 60% Age, gender (55)
Phosphoric acid(↓), isocitric acid(↓), inositol(↓), L-Glycine(↓) Serum, urine, BALF GC-MS LC =32; Healthy =29 Phosphoric acid: AUC =0.79; isocitric acid: AUC =0.57; inositol: AUC =0.58; L-Glycine: AUC =0.74 Not available (56)
Oleic acid (18:1, free fatty acid)(↑), ceramide (d18:1/16:0)(↓) Pleural effusion LC-MS/MS LC =32; tuberculosis =18 Oleic acid: AUC =0.962; ceramide: AUC =0.854 Age, gender (P>0.05) (57)

, this column summarizes whether confounding variables (e.g., age, gender, smoking status, comorbidities) were reported or statistically controlled; *, P<0.05; **, P<0.01; ***, P<0.001. ↑, upregulated in LC; ↓, downregulated in LC. AUC, area under the curve; BALF, bronchoalveolar lavage fluid; CE-MS, capillary electrophoresis-mass spectrometry; CI, confidence interval; DI-ESI-QTOF-MS, direct infusion high resolution mass spectrometry; FIE-MS, flow infusion electrospray ionization mass spectrometry; GC-MS, gas chromatography-mass spectrometry; HR, hazard ratio; LC, lung cancer; LC-MS, liquid chromatography-mass spectrometry; LC-MS/MS, liquid chromatography-tandem mass spectrometry; NSCLC, non-small cell lung cancer; PGE, prostaglandin E; PGE-MUM, prostaglandin E-major urinary metabolite; Post-op, postoperative; Pre-op, preoperative; SCLC, small cell lung cancer; UHPLC-Q-TOF-MS/MS, ultra-high-performance liquid chromatography coupled with quadrupole time-of-flight tandem mass spectrometry; UPLC-MS/MS, ultra-performance liquid chromatography-tandem mass spectrometry; UPLC-Q-TOF/MS, ultra-performance liquid chromatography coupled with quadrupole time-of-flight mass spectrometry; 1H-NMR, proton nuclear magnetic resonance.