Table 2. Performance metrics for coordination number classification using the MLP model and ELECTRUM fingerprint (598 bits) compared to the ligands fingerprint without metal encoding (Ligands) as a negative control and the ligands fingerprint + a single scalar metal identifier (Atomic). Metrics for shorter and longer fingerprints can be found in the SI.
| Fingerprint | ROC AUC | PRC AUC | Precision | Recall | F1 |
|---|---|---|---|---|---|
| Ligands | 79.8 ± 0.2 | 48.2 ± 0.8 | 66.8 ± 0.9 | 64.9 ± 0.3 | 65.7 ± 0.6 |
| Atomic | 82.2 ± 0.5 | 54.0 ± 0.4 | 72.4 ± 0.2 | 69.2 ± 0.7 | 70.6 ± 0.4 |
| ELECTRUM | 95.1 ± 0.3 | 85.2 ± 0.6 | 92.5 ± 1.2 | 91.2 ± 0.5 | 91.8 ± 0.4 |