Skip to main content
. 2025 Oct 24;26:368. doi: 10.1186/s13059-025-03836-8

Table 2.

Median agreement between genomic regions with no identified structural variant and duplications called by both sniffles2 and cuteSV, and ParaMask calls for single-copy and multicopy SNPs

Structural variant calling category
Single-copy region Duplication
ParaMask category
Accession Single-copy SNPs Multicopy SNPs Single-copy SNPs Multicopy SNPs
ES03-014 > 99.9% < 0.01% 19.41% 80.59%
ES04-014 > 99.9% < 0.01% 23.85% 76.15%