Table I. Summary of interference and protection for Tn10 and Tn5.
HO interference |
HO protection |
|||
---|---|---|---|---|
TS | NTS | TS | NTS | |
bPEC | ||||
T’ase | 63 to 58a | 65 to 61a,b | ||
T’ase | 51 to 48a | 54 to 50a | ||
IHF | 42 to 36 | 43 to 38 | 41 to 37a | 44 to 40a |
IHF | 32 to 28 | 34 to 29 | 32 to 27a | 35 to 29a |
IHF | 23 to 17 | 23 to 19 | 22 to 18a | 23 to 19a |
T’ase | 20 to 7 | 18 to 7 | 18 to 14 | 19 to 15 |
T’ase | 7 to 2 | 9 to 4 | ||
T’ase | 5 to –1 enh. | 6 to –8 enh. | –6 to –9b | –4 to –7c |
Tn5 | 20 to 7 | 20 to 7 | 17 to 13 | 19 to 6 |
Mono. | 9 to 8 | 4 to 1 enh. | ||
5 to –1 enh. | 1 to –15 enh. | –6 to –10 enh. | ||
Tn5 | 30 to 21 enh. | |||
PEC | 20 to 5 | 20 to 4 | 17 to 13 | 20 to 16 |
8 to 5 | 11 to 2 | |||
3 to –2 enh. | 1 to –3 enh. | 3 to –2 enh. |
Hydroxyl radical interference and protection for the Tn10 bPEC, Tn5 monomer and Tn5 PEC. Tn5 data was abstracted from the figures in Bhasin et al. (2000).
aLost in conversion from bPEC to tPEC.
bRegion of very weak protection.
cLost in the presence of Ca2+.
enh., regions of enhancement.
Mono., monomer.
TS, transferred strand.
NTS, non-transferred strand.