| AEM | Applied and Environmental Microbiology |
| AI/ML | Artificial intelligence/machine learning |
| AMPs | Antimicrobial peptides |
| AMR | Antimicrobial resistance |
| ARG | Antibiotic resistance gene |
| AST | Antimicrobial susceptibility testing |
| BGC | Biosynthetic gene cluster |
| BL/BLI | β-lactam/β-lactamase inhibitor (combination therapy) |
| CAP | Chloramphenicol |
| Cas12a | CRISPR-associated endonuclease 12a |
| CRISPR | Clustered regularly interspaced short palindromic repeats |
| DBO | Diazabicyclooctane (β-lactamase inhibitor class) |
| Dx | Diagnostics |
| EAOPs | Electrochemical advanced oxidation processes |
| eDNA | Extracellular DNA |
| ESBL | Extended-spectrum β-lactamase |
| GLASS | Global Antimicrobial Resistance and Use Surveillance System (WHO) |
| HGT | Horizontal gene transfer |
| ICE | Integrative and conjugative element |
| KPC | Klebsiella pneumoniae carbapenemase |
| LPS | Lipopolysaccharide |
| mcr | mobilized colistin resistance genes (e.g., mcr-1–mcr-10) |
| MBL | Metallo-β-lactamase |
| MFS | Major facilitator superfamily (efflux pumps) |
| MGE | Mobile genetic element |
| MNPs | Micro- and nanoplastics |
| MOFs | Metal–organic frameworks |
| NDM | New Delhi metallo-β-lactamase |
| NF | Nanofiltration |
| OM | Outer membrane |
| OXA | Class D oxacillinase-type β-lactamase |
| PBPs | Penicillin-binding proteins |
| PEtN | Phosphoethanolamine |
| PHB | Polyhydroxybutyrate (bioplastic) |
| PLA | Polylactic acid (bioplastic) |
| QC | Quality control |
| QRDR | Quinolone resistance–determining region |
| QS | Quorum sensing |
| RND | Resistance–nodulation–division (efflux pumps) |
| ROS | Reactive oxygen species |
| TOC | Total organic carbon |
| UF | Ultrafiltration |
| WBE | Wastewater-based epidemiology |
| WGS | Whole-genome sequencing |
| WWTP | Wastewater treatment plant |