| NGS | Next-generation high-throughput sequencing |
| SMRT | Single-molecule real time |
| CCTCC | China Center for Type Culture Collection |
| PDA | potato dextrose agar |
| DNBs | DNA nanoballs |
| cPAS | Combinatorial probe-anchor synthesis |
| CCS | Circular Consensus Sequencing |
| GO | Gene Ontology |
| KEGG | Kyoto Encyclopedia of Genes and Genomes |
| COG | Clusters of Orthologous Groups |
| NR | Non-Redundant Protein Database database |
| TCDB | Transporter Classification Database |
| CAZY | Carbohydrate-Active enZYmes |
| UHPLC-MS/MS | Ultra High-Performance Liquid Chromatography-Tandem Mass Spectrometry |
| CV | Coefficient of variation |
| PLS-DA | Partial least squares discriminant analysis |
| PCA | Principal component analysis |
| tRNAs | Transfer RNAs |
| rRNAs | ribosomal RNAs |
| snRNAs | small nuclear RNAs |
| miRNAs | microRNAs |
| ZWMs | Zero-Mode Waveguide stands |
| XCMS | eXtracted Chromatographic Mass Spectrometry |
| LC-MS/MS | Liquid Chromatography—Tandem Mass Spectrometry |