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Criteria used for pattern recognition with the PRATT program [28]
| Parameter | Description | Value |
| C% | Pattern conservation | 95% (dog) 90% (rat) |
| L | Maximum pattern length | 25 amino acids |
| S | Research complexity | High (E = 0; dog) Medium (E = 1; rat) |
| PN | Maximum number of pattern symbols | 25 |
| PX | Maximum number of consecutive undetermined amino acids | 5 |
| FN | Maximum number of flexible gaps | 2 |
| FL | Maximum flexibility of a flexible wildcard | 3 |
| FP | Maximum flexibility product | 10 |
