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. 2005 Oct 19;33(18):5914–5923. doi: 10.1093/nar/gki890

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© The Author 2005. Published by Oxford University Press. All rights reserved

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Schematic representation of the experimental design. See Materials and Methods for details. The key features of the design are the use of a single pair of RNA samples for all analyses, mixed together in varying proportions and analyzed in technical replicates on each platform. Unlike the Affymetrix platform, each Illumina BeadArray slide contains multiple arrays, allowing us to analyze a complete dilution series on one slide. Note that the BeadArray slides actually contain eight arrays per slide, but we only used six for the data described here.