Table 1.
A summary of the detection of RREO events in EST and mRNA sequences from six species
Human | Mouse | Rat | Chicken | Zebrafish | Fruit fly | |
---|---|---|---|---|---|---|
Number of EST sequences in GenBank | 6 057 800 | 4 334 174 | 701 039 | 540 881 | 630 156 | 383 407 |
Number of mRNA sequences in GenBank | 194 508 | 172 159 | 17 575 | 26 296 | 13 064 | 15 897 |
No. of EST sequences confirming non-linear single exon splicing | 25 (Supplementary Table A)a | 28 (Supplementary Table E)a | 2 (Supplementary Table I)a | 0 | 3 (Supplementary Table N)a | 6 (Supplementary Table Q)a |
No. of mRNA sequences confirming non-linear single exon splicing | 3 (Supplementary Table B)a | 9 (Supplementary Table F)a | 0 | 1 (Supplementary Table K)a | 1 (Supplementary Table O)a | 1 (Supplementary Table R)a |
No. of EST sequences confirming non-linear multi-exon splicing | 221 (Supplementary Table C)a | 48 (Supplementary Table G)a | 15 (Supplementary Table J)a | 9 (Supplementary Table L)a | 23 (Supplementary Table P)a | 1 (Supplementary Table S)a |
No. of mRNA sequences confirming non-linear multi-exon splicing | 14 (Supplementary Table D)a | 13 (Supplementary Table H)a | 0 | 2 (Supplementary Table M)a | 0 | 0 |
Total no. of expressed sequences confirming non-linear splicing | 263 | 98 | 17 | 12 | 27 | 8 |
Total no. of genes involved in non-linear splicing | 178 | 61 | 7 | 6 | 8 | 5 |
aEach supplementary table contains the EST or mRNA GenBank ID, Ensembl exon and gene identifiers as well as the sequence of the 100 bp non-linear splice sequence used to detect each event.