Table II. Oligonucleotides used for the methyltransferase stimulation assay.
Oligonucleotide | Sequence |
---|---|
um CG | AGACCGGTGCCAGCGCAGCTGAGCCGGATCTCTGGCCACGGTCGCGTCGACTCGGCCTAG |
hm CG | AGACMGGTGCCAGMGCAGCTGAGCMGGATCTCTGGCCACGGTCGCGTCGACTCGGCCTAG |
me CG | AGACMGGTGCCAGMGCAGCTGAGCMGGATCTCTGGMCACGGTCGMGTCGACTCGGMCTAG |
hm CCG | AGAMCGGTGCCAGCGCAGCTGAGMCGGATCTCTGGCCACGGTCGCGTCGACTCGGCCTAG |
me CCG | AGAMCGGTGCCAGCGCAGCTGAGMCGGATCTCTGGCMACGGTCGCGTCGACTCGGCMTAG |
me CWG | AGACCGGTGCMAGCGMAGMTGAGCCGGATCTCTGGCCACGGTMGCGTMGAMTCGGCCTAG |
M represents 5-methylcytosine. um, unmethylated; hm, hemimethylated; me, methylated.