TABLE 1.
Examples of proteins identified by MS/MS following coimmunoprecipitation with the anti-LMP1 antibody OT21C applied on membrane rafts derived from the C15 NPC xenograft
| Protein | Accession no.a | MW | Peptide no. | Peptide sequence(s) | |||||
|---|---|---|---|---|---|---|---|---|---|
| HSP90beta | NP_031381 | 83554 | 1 | ADLINNLGTIAK | |||||
| HSP70 PROT5 (BiP) | NP_005338 | 72402 | 6 | DAGTIAGLNVMR | TWNDPSVQQDIK | TFAPEEISAMVLTK | ITPSYVAFTPEGER | MKLSLVAAMLLLLSAAR | IINEPTAAAIAYGLDKR |
| HSP70.1A | NP_005336 | 70280 | 6 | DAGTIAGLNVLR | TTPSYVAFTDTER | AFYPEEISSMVLTK | IINEPTAAAIAYGLDR | NQVALNPQNTVFDAKR | |
| Ribophorin 1 | NP_002941 | 68641 | 5 | FPLFGGWK | ALTSEIALLQSR | SEDLLDYGPFR | ATSFLLALEPELEAR | YDYQRQPDSGISSIR | |
| Calnexin | NP_001737 | 67982 | 2 | IVDDWANDGWGLKK | KIPNPDFFEDLEPFR | ||||
| TRAF3 | Q13114 | 66015 | 2 | NTGLLESQLSR | HIGDFKPDP | ||||
| Galectin-9 | NP_033665 | 39835 | 3 | FEDGGYVVCNTR | SILLSGTVLPSAQR | NTQIDNSWGSEER | |||
a
NCBI RefSeq or Swiss.Prot database.