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. 2005 Nov;79(21):13656–13666. doi: 10.1128/JVI.79.21.13656-13666.2005

TABLE 7.

Only acidic amino acids can rescue assembly of hybrid core particles containing a positively charged inserta

OMP-2 epitopeb Sequenceb Linker type Insert pI Assembly resultc
L L-EDANGTRDHKKGRHT-L Small, hydrophobic, nonpolard 8.74
EE EE-EDANGTRDHKKGRHT-EE Acidic 4.88 +
DD DD-EDANGTRDHKKGRHT-DD Acidic 4.67 +
P P-EDANGTRDHKKGRHT-P Bulky, hydrophobic, nonpolar 8.74
QQ QQ-EDANGTRDHKKGRHT-QQ Amide, hydrophobic, uncharged, polar 8.74
TT TT-EDANGTRDHKKGRHT-TT Nucleophilic, uncharged, polar 8.74
YY YY-EDANGTRDHKKGRHT-YY Aromatic, hydrophobic, uncharged, polar 8.56
a

The C terminus used for OMP-2 hybrid core particles was HyW2.

b

E, glutamic acid; D, aspartic acid; P, proline; Q, glutamine; T, threonine; Y, tyrosine.

c

For explanation of assembly scores (+, −), see Materials and Methods.

d

Leucine linker due to cloning restriction site.