Table 1.
Gene | Forward & reverse primers 5' → 3' | [C] a | Amplicon size (bp) | Tm b (°C) | Slope | R2c | E d |
ACTB | ATGCCTCCTGCACCACCA GCATTTGCGGTGGACGAT |
300 | 125 | 85 | -3.597 | 0.999 | 1.897 |
YWHAZ | TGTAGGAGCCCGTAGGTCATCT TTCTCTCTGTATTCTCGAGCCATCT |
100 | 102 | 79 | -3.335 | 0.988 | 1.995 |
RPL19 | CAACTCCCGCCAGCAGAT CCGGGAATGGACAGTCACA |
200 | 76 | 83 | -3.342 | 0.992 | 1.992 |
GAPDH | ATGCCTCCTGCACCACCA AGTCCCTCCACGATGCCAA |
100 | 76 | 84 | -3.485 | 0.991 | 1.936 |
G6PDH | TGACCTATGGCAACCGATACAA CCGCAAAAGACATCCAGGAT |
300 | 76 | 81 | -3.363 | 0.965 | 1.983 |
SDHA | CATCCACTACATGACGGAGCA ATCTTGCCATCTTCAGTTCTGCTA |
200 | 90 | 82 | -3.643 | 0.992 | 1.881 |
PrP | GCCAAAAACCAACATGAAGCAT TGCTCATGGCACTTCCCAG |
300 | 95 | 83 | -3.338 | 0.995 | 1.993 |
a Primer concentrations in nM
b Theoretical amplicon melting temperature calculated with Primer Express software (Applied Biosystems)
c Correlation coefficient
d PCR efficiency