Skip to main content
. 2025 Oct 18;5(11):5237–5252. doi: 10.1021/jacsau.5c01072

3. Critical Summary of Autonomous Bioluminescence Systems.

feature key advances limitations future opportunities refs
bacterial autonomous bioluminescence functional reconstruction of luxCDABE operons across diverse hosts, with metabolic support from luxG or frp. low quantum yield (∼0.1–0.2) limits the detection of rapid and low-intensity events. AI-guided mutagenesis and de novo design to enhance catalytic efficiency and reaction kinetics. ,,,,
Cryo-EM elucidation of the LuxC–LuxE complex, revealing the structural basis of fatty acid reduction. metabolic burden from long-chain aldehyde synthesis may impair host growth. spectral expansion from blue-green toward near-infrared for deep-tissue imaging.
modularized size-reduced gene cassettes for delivery via viral vectors and other compact systems
fungal autonomous bioluminescence complete pathway elucidation in N. nambi, enabling autonomous luminescence in plants. in nonplant hosts, caffeic acid availability severely limits brightness. structural determination of Luz to guide targeted protein engineering. ,,
exploitation of the plant shikimate pathway for endogenous caffeic acid production. lack of crystal structure for Luz hampers rational mutagenesis and spectral tuning. engineering caffeic acid biosynthesis pathways into nonplant hosts.
integration of Luz-based reporters into plant synthetic biology for spatiotemporal monitoring of gene expression and physiology.
color modulation of autonomous bioluminescence Lux emission tuning through active-site mutations and BRET fusions with fluorescent proteins. fungal multicolor emission demonstrated only in vitro, with limited in vivo validation. use of AI-based structural prediction and molecular docking to optimize BRET donor–acceptor configurations. ,,
in vitro generation of distinct fungal emission colors via luciferin analogs. RET efficiency strongly depends on precise spatial arrangement, complicating design. in vivo compatible synthesis of fungal luciferin analogs for multicolor plant imaging.
development of nano-lanternX (NLX) for multicolor autonomous imaging across hosts.
autonomous bioluminescence imaging applications ilux and ilux2 enable single-cell bacterial imaging with brightness comparable to conventional luciferases. Lux brightness in mammalian systems remains insufficient for high-speed or deep-tissue imaging. engineering Lux for increased photon output and faster emission kinetics for dynamic process monitoring. ,,,
co Lux supports long-term luminescence in mammalian cells, with multicolor capability via NLX. fungal system’s performance is restricted outside plant hosts due to caffeic acid limitation. introducing caffeic acid biosynthesis pathways into nonplant hosts to enable robust Luz imaging.
fungal pathway achieves naked-eye–visible, substrate-free imaging in transgenic plants. high-resolution imaging often requires long exposure times, limiting temporal resolution. developing hybrid Lux–Luz systems or chimeric pathways to combine complementary strengths.
bioreporter applications Lux-based reporters developed for diverse targets: genotoxicity, oxidative stress, metals, quorum sensing, circadian rhythms, and signaling pathways. autonomous bioluminescent metabolic burden can reduce sensitivity in long-term assays. metabolic streamlining of Lux and Luz for stable, low-burden long-term sensing. ,,
ratiometric Lux designs (e.g., NLX-calcium sensors) improve quantitative reliability. Luz applications remain plant-centric, with limited cross-host adaptability. expanding Luz reporter applications to nonplant systems via precursor pathway engineering.
Luz-based reporters in plants enable hormone and developmental pathway monitoring without substrate addition. quantitative accuracy in fluctuating metabolic states requires normalization strategies. developing multiplexed, autonomous, multiparameter biosensors for real-time environmental and biomedical monitoring.
developing hybrid Lux–Luz systems or chimeric pathways to combine complementary strengths.