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. 2002 Jan;68(1):271–279. doi: 10.1128/AEM.68.1.271-279.2002

TABLE 1.

Comparison of the translational products of genes located in the prp cluster of several organisms with the translational products of prpB, prpC, acnM, and ORF5 of B. sacchari IPT101T

Strain mol% identity with products of B. sacchari IPT101T genesa
Referenceb
prpB prpC acnM ORF5
R. eutropha HF39 64 82 91 84 8
B. cepacia NDc 88 83 80
N. meningitidis serogroup A 63 74 79 67 34
N. meningitidis serogroup B 63 74 78 67 49
P. aeruginosa PAO1 61 54 83 71 46
P. putida KT2440 64 53 86 83
P. fluorescens 60 54 84 77
P. syringae 64 52 d 79
E. coli K-12 58 76 ND ND 50
E. coli O157:H17 57 76 ND ND 35
S. enterica serovar Typhimurium 58 75 ND ND 22
L. pneumophila ND 51 ND ND
V. cholerae 57 51 75 69 19
S. putrefaciens 66 54 84 80
R. metallidurans CH34 60 84 89 80
a

Levels of amino acid identity.

b

The data for some of the organisms were obtained from the following sources: B. cepacia, P. fluorescens, and R. metallidurans, http://www.expasy.ch/cgi-bin/nicesite.p1?PS00161; P. putida, P. syringae, and S. putrefaciens, http://www.tigr.org/cgi-bin/BlastSearch/blast.cgi?organism; and L. pneumophila, accession no. AAD42885.

c

ND, not detected in the database.

d

—, only incomplete sequences were available.