TABLE 2.
Proteins specifically associated with Prp43pa
| Category and protein | Accession no.b | Category and protein | Accession no.b | |
|---|---|---|---|---|
| RNA Pol I machinery | ||||
| Rpa190p | P10964 | |||
| Rpa135p | P22138 | |||
| Rpa49p | Q01080 | |||
| Rpa34p | P47006 | |||
| Rpc19p | P28000 | |||
| 90S/Pol I | ||||
| Utp10p | P42945 | |||
| Utp15p | Q04305 | |||
| 90S | ||||
| Utp9p | P38882 | |||
| Utp14p | Q04500 | |||
| Utp20p | P35194 | |||
| Utp22p | P53254 | |||
| Bms1p | Q08965 | |||
| Kre33p | P53914 | |||
| Krr1p | P25586 | |||
| Nsr1p | P27476 | |||
| 90S/60S | ||||
| Has1p | Q03532 | |||
| Nop13p | P53883 | |||
| Rrp5p | Q05022 | |||
| Rrp12p | Q12754 | |||
| 60S | ||||
| Arx1p | Q03862 | |||
| Brx1p | Q08235 | |||
| Dbp10p | Q12389 | |||
| Ebp2p | P36049 | |||
| Erb1p | Q04660 | |||
| Fpr3p | P38911 | |||
| Fpr4p | Q06205 | |||
| Lsg1p | P53145 | |||
| Mrt4p | P33201 | |||
| Noc1p | Q12176 | |||
| Nog1p | Q02892 | |||
| Nog2p | P53742 | |||
| Nop12p | Q08208 | |||
| Nop53p | Q12080 | |||
| Npa1p | P34241 | |||
| Nsa2p | P40078 | |||
| Nsa3p | P38779 | |||
| Nug1p | P40010 | |||
| Rpf1p | P38805 | |||
| Rrp1p | P35178 | |||
| Rrp14p | P36080 | |||
| Spb1p | P25582 | |||
| Ssf2p | Q12153 | |||
| Xrn1p | P22147 | |||
| YCR072cp | P25382 | |||
| 40S | ||||
| Pfa1p | P53866 | |||
| Rio1p | Q12196 | |||
| H/ACA snoRNP | ||||
| Cbf5p | P33322 | |||
| Gar1p | P28007 | |||
| Nhp2p | P32495 | |||
| C/D snoRNP | ||||
| Nop1p | P15646 | |||
| Nop56p | Q12460 | |||
| Nop58p | Q12499 | |||
| Snu13p | P39990 | |||
| snoRNP | ||||
| Srp40p | P32583 | |||
| Other ribosome biogenesis components | ||||
| Arb1p | P40024 | |||
| Dbp2p | P24783 | |||
| Gno1p | P53335 | |||
| YCR016wp | P25617 | |||
| Chromatin remodeling/RNA Pol II-associated factors | ||||
| Arp9p | Q05123 | |||
| Snf2p | P22082 | |||
| Snf5p | P18480 | |||
| Spt2p | P06843 | |||
| Spt7p | P35177 | |||
| Ssl1p | Q04673 | |||
| Swi1p | P09547 | |||
| Swi3p | P32591 | |||
| Taf6p | P53040 | |||
| Histones | ||||
| Histone H2A.1 | P04911 | |||
| Histone H2A.2 | P04912 | |||
| Htz1p (histone H2A variant) | Q12692 | |||
| Histone H2B.1 | P02293 | |||
| Histone H2B.2 | P02294 | |||
| Histone H4 | P02309 | |||
| Splicing factors | ||||
| Brr2p | P32639 | |||
| Bud31p | P25337 | |||
| Clf1p | Q12309 | |||
| Cwc2p | Q12046 | |||
| Cwc23p | Q6B1S2 | |||
| Lea1p | Q08963 | |||
| Lsm12p | P38828 | |||
| Ntc20p | P38302 | |||
| Prp19p | Q8NJV2 | |||
| Prp45p | P28004 | |||
| Prp46p | Q12417 | |||
| Prp8p | P33334 | |||
| SmBp | P40018 | |||
| SmD2p | Q06217 | |||
| SmD3p | P43321 | |||
| Snu114p | P36048 | |||
| Spp382p | Q06411 | |||
| Syf2p | P53277 | |||
| YKR022cp | P36118 | |||
| Transport | ||||
| Gsp1p | P32835 | |||
| Gsp2p | P32836 | |||
| Srp1p | Q02821 | |||
| Sxm1p | Q04175 | |||
| Unknown | ||||
| YGR130cp | P53278 | |||
| YJL122wp | P47019 | |||
| YOR252wp | Q08687 |
a
Ribosomal proteins have been omitted from this table. The proteins listed were not detected in the mock purification (Fig. 3, lane 1).
b
Swiss Prot database.