TABLE 2.
C. glutamicum candidate coding sequences possibly involved in the utilization of sulfonates and their esters, based on similarity searches
| C. glutamicum coding sequence | Similar gene and/or functiona | Organism | E value | No. of identical amino acids/total no. (%) |
|---|---|---|---|---|
| cg1147 (ssuI) | actI, actinorhodin polyketide dimeraseb | Streptomyces coelicolor | 8e-11 | 39/132 (29) |
| cg1148 | Hypothetical protein | No significant hit | ||
| cg1149 | Hypothetical protein | No significant hit | ||
| cg1150 | Putative reductasec | S. coelicolor | 1e-52 | 102/184 (55) |
| cg1151 (seuA) | dszA, dibenzothiophene desulfurization enzyme Ab | Rhodococcus sp. strain IGTS8 | 3e-77 | 173/443 (39) |
| cg1152 (seuB) | dszC, dibenzothiophene desulfurization enzyme Cb | Rhodococcus sp. strain IGTS8 | 3e-13 | 94/365 (25) |
| cg1153 (seuC) | dszC, dibenzothiophene desulfurization enzyme Cb | Rhodococcus sp. strain IGTS8 | 5e-30 | 105/384 (27) |
| cg1156 (ssuD2) | ssuD, sulfonataseb | B. subtilis | 2e-92 | 179/359 (49) |
| cg1376 (ssuD1) | ssuD, sulfonataseb | B. subtilis | 6e-94 | 181/358 (50) |
| cg1377 (ssuC) | ssuC, transporter (transmembrane)b | E. coli | 8e-53 | 98/240 (40) |
| cg1379 (ssuB) | ssuB, transporter (ATP binding)b | E. coli | 1e-49 | 115/228 (50) |
| cg1380 (ssuA) | ssuA, transporter (periplasmatic)b | B. subtilis | 1e-30 | 104/328 (31) |
a
Only the genes that represent the best hits for the C. glutamicum coding sequences analyzed in similarity searches on the protein level and the corresponding organisms are shown.
b
Proteins deduced from the coding sequences analyzed were compared with the Swiss-Prot database.
c
Proteins deduced from the coding sequences analyzed were compared with the NCBI nonredundant database.