| 5xFAD | Transgenic Alzheimer’s disease mouse model |
| ABCA1 | ATP-binding cassette transporter A1 |
| ABCG1 | ATP-binding cassette transporter G1 |
| ACAT1 | Acyl-CoA:cholesterol acyltransferase 1 |
| AD | Alzheimer’s disease |
| ALS | Amyotrophic lateral sclerosis |
| APOE | Apolipoprotein E |
| APOJ (CLU) | Apolipoprotein J (Clusterin) |
| APP/PS1 | APP/Presenilin-1 double-transgenic AD mouse |
| ARMs | Activated response microglia |
| AXL | AXL receptor tyrosine kinase |
| Aβ | Amyloid beta |
| CAII | Carbonic anhydrase II |
| CCL2/CCR2 | C-C chemokine ligand 2/C-C chemokine receptor 2 |
| CD68 | Cluster of Differentiation 68 |
| CE | Cholesteryl ester |
| CLEC7A | C-type lectin domain containing 7A |
| CNS | Central nervous system |
| CSF1/CSF1R | Colony-stimulating factor 1/colony-stimulating factor 1 receptor |
| CST7 | Cystatin F |
| CX3CL1/CX3CR1 | C-X3-C chemokine ligand 1/C-X3-C chemokine receptor 1 |
| cGAS | Cyclic GMP-AMP synthase |
| DAMs | Disease-associated microglia |
| DHCR24 | 24-Dehydrocholesterol reductase |
| EAE | Experimental autoimmune encephalomyelitis |
| EVT | Endovascular thrombectomy |
| FDFT1 (SQS) | Farnesyl-diphosphate farnesyltransferase 1 (Squalene synthase) |
| HLA-DR | Human leukocyte antigen D-related |
| HR | Hazard ratio |
| Iba1 | Ionized calcium-binding adapter molecule 1 |
| IGF-1 | Insulin-like growth factor-1 |
| IL | Interleukin |
| IL-1β | Interleukin-1 beta |
| IL-4 | Interleukin-4 |
| IL-6 | Interleukin-6 |
| IL-10 | Interleukin-10 |
| IL-34 | Interleukin-34 |
| ITGAX | Integrin alpha X (CD11c) |
| LD | Lipid droplet |
| LDAMs | Lipid droplet–accumulating microglia |
| LPL | Lipoprotein lipase |
| LPS | Lipopolysaccharide |
| LXR | Liver X receptor |
| MAC3 | Lysosomal glycoprotein (microglia/macrophage marker) |
| MBP | Myelin basic protein |
| MCI | Mild cognitive impairment |
| MGnD | Microglial neurodegenerative phenotype |
| MMP | Matrix metalloproteinase |
| mRS | Modified Rankin Scale |
| NLRP | NOD-, LRR- and pyrin domain-containing (e.g., NLRP3 inflammasome) |
| NPC2 | Niemann-Pick disease type C2 protein |
| OPN | Osteopontin |
| OxPCs | Oxidized phosphatidylcholines |
| P2RY12/P2RY13 | Purinergic receptor P2Y12/P2Y13 |
| ROS | Reactive oxygen species |
| SAMP8 | Senescence-accelerated mouse prone 8 |
| SASP | Senescence-associated secretory phenotype |
| sTREM2 | Soluble TREM2 |
| SPP1 | Secreted phosphoprotein 1 |
| STING | Stimulator of interferon genes |
| tMCAO | Transient middle cerebral artery occlusion |
| TAM | Tyro3-Axl-Mer tyrosine kinase receptor family |
| TGF | Transforming growth factor |
| TMEM119 | Transmembrane protein 119 |
| TNF | Tumor necrosis factor |
| TREM2 | Triggering Receptor Expressed on Myeloid cells-2 |
| TYROBP (DAP12) | TYRO protein tyrosine kinase-binding protein |
| WAMs | White matter-associated microglia |