Table 1.
Amino acids representation by single letter and three letters for the construction of RF, SVM, and GNN models based on amino acids composition feature.
| One-letter | Three-letter | Amino acid name | One-letter | Three-letter | Amino acid name |
|---|---|---|---|---|---|
| A | Ala | Alanine | N | Asn | Asparagine |
| B | Asx | Aspartic/Asparagine | P | Pro | Proline |
| C | Cys | Cysteine | Q | Gln | Glutamine |
| D | Asp | Aspartic acid | R | Arg | Arginine |
| E | Glu | Glutamic acid | S | Ser | Serine |
| F | Phe | Phenylalanine | T | Thr | Threonine |
| G | Gly | Glycine | U | Sec | Selenocysteine |
| H | His | Histidine | V | Val | Valine |
| I | Ile | Isoleucine | W | Trp | Tryptophan |
| K | Lys | Lysine | X | Xxx | Any |
| L | Leu | Leucine | Y | Tyr | Tyrosine |
| M | Met | Methionine | Z | Glx | Glutamine/Glutamic |