| AD | Alzheimer’s Disease |
| AMP | Adenosine Monophosphate |
| AST | Astrocytoma |
| cIM | Circular Ion Mobility |
| CCS | Collision Cross-Section |
| CL | Cardiolipin |
| CRC | Colorectal Cancer |
| CV | Compensation Voltage |
| DESI-MSI | Description Electrospray/Ionization–Mass Spectrometry Imaging |
| DTIMS | Drift Tube Ion Mobility Spectrometry |
| DHB | 2,5-dihydroxybenzoic acid |
| FAIMS | High-Field Asymmetric Ion Mobility Spectrometry |
| GBM | Glioblastoma |
| GD1 | Ganglioside D1 |
| GPC | Glycerophosphocholine |
| HPLC | High-Performance Liquid Chromatography |
| HDI | High-Definition Imaging |
| IM | Ion Mobility |
| IM-MSI | Ion Mobility–Mass Spectrometry Imaging |
| IM-MS | Ion Mobility–Mass Spectrometry |
| IMS-MSI | Ion Mobility Spectrometry–Mass Spectrometry Imaging |
| IR | Infrared Spectroscopy |
| IR-MALDESI-MSI | Infrared Matrix-Assisted Laser Desorption Electrospray Ionization–Mass Spectrometry Imaging |
| IR-MALDI | Infrared Matrix-Assisted Laser Desorption/Ionization |
| KO | Knockout |
| LC-MS | Liquid Chromatography–Mass Spectrometry |
| LA-ICP-MSI | Laser Ablation Inductively Coupled Plasma–Mass Spectrometry Imaging |
| LAESI | Laser Ablation Electrospray Ionization |
| LAESI-MSI | Laser Ablation Electrospray Ionization–Mass Spectrometry Imaging |
| LESA-FAIMS | Liquid Extraction Surface Analysis–High-Field Asymmetric Ion Mobility Spectrometry |
| LESA-MSI | Liquid Extraction Surface Analysis–Mass Spectrometry Imaging |
| LPE | Lysophosphatidylethanolamine |
| LPS | Lysophosphatidylserine |
| MSI | Mass Spectrometry Imaging |
| MS/MS | Tandem Mass Spectrometry |
| MALDI-MSI | Matrix-Assisted Laser Desorption/Ionization–MSI (mass spectrometry imaging) |
| MALDI-MSI-IMS | Matrix-Assisted Laser Desorption/Ionization–Mass Spectrometry Imaging–Ion Mobility Spectrometry |
| MCTS | Multicellular Tumor Spheroid |
| MRM | Multiple Reaction Monitoring |
| NAA | N-Acetylaspartate |
| NanoDESI-IM-MS | Nanospray Desorption Electrospray Ionization–Ion Mobility–Mass Spectrometry |
| NMDA | N-Methyl-D-Aspartate |
| NMR | Nuclear Magnetic Resonance |
| OTCD | On-tissue Chemical Derivatization |
| PA | Phosphatidic Acid |
| PC | Phosphatidylcholine |
| PE | Phosphatidylethanolamine |
| PS | phosphatidylserine |
| PANC-1 | Human Pancreatic Cancer |
| PSC | Pancreatic Stellate Cells |
| QMSI | Quantitative-MSI |
| RF | Radial Radiofrequency |
| SIMS | Secondary Ion Mass Spectrometry |
| SLOS | Smith–Lemli–Opitz Syndrome |
| SM | Sphingomyelin |
| SRIG | Stacked Ring Ion Guide |
| SRM | Selected Reaction Monitoring |
| TBI | Traumatic brain injury |
| TG | Triacylglycerol |
| TIMS | Trapped-Ion Mobility Spectrometry |
| TOF-SIMS | Time-of-Flight Secondary Ion Mass Spectrometry |
| TWIMS | Traveling-Wave Ion Mobility Spectrometry |
| UV | Ultraviolet Spectroscopy |