For indicated P97 paralogs |
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|
mhp107 |
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|
211-1020_U |
Forward primer, mhp107 |
GCGGATCCGATAATACTTATAATGCC |
211-1020_L |
Reverse primer, mhp107 |
ATGGATCCCTCTTTGGGAAATTGTTC |
mhp271 |
|
|
Mhp271-f |
Forward primer, mhp271 |
TTGGTTGGGTCTATTATTGG |
Mhp271-r |
Reverse primer, mhp271 |
TAACTTTGCTAAATCATCGG |
mhp280 |
|
|
Mhp280-f |
Forward primer, mhp280 |
AAACAGCCGTGAAACTGC |
Mhp280-r |
Reverse primer, mhp280 |
GCATTTTTGGATTCTTCTGG |
mhp385 |
|
|
662-1020_U |
Forward primer, mhp385 |
ACGGATCCGATCAGCCACAGATTCAC |
662-1020_L |
Reverse primer, mhp385 |
ACGGATCCTAAAGCAAATAGTGATTCTGA |
mhp493 |
|
|
545B-1020_U |
Forward primer, mhp493B |
ACGGATCCCAAAAATTAGCCACTTCC |
545B-1020_L |
Reverse primer, mhp493B |
ACGGATCCATCTATACTTCTTCAGTC |
mhp684 |
|
|
347-1020_U |
Forward primer, mhp682 |
ACGGATCCAATCTTTTATCCGCTGGG |
347-1020_L |
Reverse primer, mhp682 |
ACGGATCCTGTTTGCTGATTTGAGGC |
For indicated P102 paralogs |
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|
mhp275 |
|
|
033-1020_U |
Forward primer, mhp275 |
GCGGATCCATTTTTGGATGGAAACAAGAC |
033RT-r |
Reverse primer, mhp275 |
TGGGCTTACACCTTCTTTGGC |
mhp272 |
|
|
036RT-f2 |
Forward primer, mhp272 |
GGCAAATGCTTTGATTTCC |
036RT-r2 |
Reverse primer, mhp272 |
GTTCTTTGCTGTGGACTTC |
mhp108 |
|
|
210RT-f2 |
Forward primer, mhp108 |
GCAACAGCAAGTGGAACTGC |
210RT-r2 |
Reverse primer, mhp108 |
AAGTTGGTAAGCCGAGACTG |
mhp683 |
|
|
348-1020_U |
Forward primer, mhp683 |
CGGGATCCCAAGCAAAAAATGAAAAAGAAG |
348RT-r |
Reverse primer, mhp683 |
TTTTACTTTAGCCGAAGAGGC |
mhp384 |
|
|
663-1020_U |
Forward primer, mhp384 |
GCGGATCCACTAAATTATCACGAAGATCAC |
663RT-r |
Reverse primer, mhp384 |
TAGAACCATTGTAGCAGCCGG |
For intergenic regions |
|
|
P97-3′-f |
Forward primer, mhp183 |
GATTCAAAATCCGGTGATCC |
P102-5′-r |
Reverse primer, mhp182 |
CTAGCTTGTTCTGTATTTCC |
Mhp107-f |
Forward primer, mhp107 |
AAATGATGAAAATAGCCCG |
Mhp108-r |
Reverse primer, mhp108 |
AGTTCCACTTGCTGTTGC |
Mhp271-f |
Forward primer, mhp271 |
CCTGAAACTCCAAAAACAGAAG |
Mhp272-r |
Reverse primer, mhp272 |
CAAAAGCCCGAACTAAGTCATAC |
Mhp384-f |
Forward primer, mhp384 |
AGAGCATCAAAAGCGTTTAGTC |
Mhp385-r |
Reverse primer, mhp385 |
TTCAGCAGCCAAGCCAGTAG |
Mhp683-f |
Forward primer, mhp683 |
CCGCTTTTACTTCTTTATTAGCC |
Mhp684-r |
Reverse primer, mhp684 |
GCCTCAAATCAGCAAACAAG |
For controls |
|
|
P97RT-f |
Forward primer for control reaction, P97 |
GGAAATTATGCCTATGAATTCG |
P97RT-r |
Reverse primer for control reaction, P97 |
GTGCTCTGTTAGTTTCTAGTCC |
P102RT-f2 |
Forward primer for control reaction, pig cyclophilin |
CCCGATGTGTTTTTAGATGG |
P102RT-r2 |
Reverse primer for control reaction, pig cyclophilin |
CCTTTTCCTTTTCTATCGGC |
cyclo-f |
Forward primer for control reaction, pig cyclophilin |
TAACCCCACCGTCTTCTT |
cyclo-r |
Reverse primer for control reaction, pig cyclophilin |
TGCCATCCAACCACTCAG |