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. 2025 Dec 5;18:11. doi: 10.1186/s13148-025-02012-w

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© The Author(s) 2025

Open Access This article is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License, which permits any non-commercial use, sharing, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if you modified the licensed material. You do not have permission under this licence to share adapted material derived from this article or parts of it. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by-nc-nd/4.0/.

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Fig. 2 — Relationship between gene expression and LPS induced DNA methylation. A Relative gene expression of PEPD in HT29 cells treated with F. periodonticum LPS compared to untreated cells. B Percentage of methylation of PEPD promoter region treated with F. periodonticum LPS. C Relative gene expression of VAV3 treated with F. periodonticum LPS compared to untreated cells. D Percentage of methylation of VAV3 promoter region compared to untreated cells. Three replicates were used for gene expression and data was analysed with a paired t-test. %mC (percentage of methylated cytosine)