TABLE 4.
Genea | Fold inductionb
|
|||||
---|---|---|---|---|---|---|
MC (wt) | MC (recA) | UV 30′ (wt) | UV 30′ (recA) | UV 60′ (wt) | UV 60′ (recA) | |
ybaK | 2.3 | −1.1 | 1.3 | −1.3 | 2.6 | 1.5 |
cwlD | 2.1 | 1.0 | 1.3 | −1.1 | 2.6 | 1.5 |
dinB | 55 | 1.0 | 30 | 1.0 | 43 | 3.5 |
ydiO | 3.5 | 1.7 | 2.8 | 1.2 | 2.5 | 1.6 |
ydiP | 3.6 | 1.8 | 3.1 | 1.3 | 2.8 | 1.7 |
pcrA | 2.0 | 1.5 | 2.0 | 1.4 | 1.6 | 1.1 |
ligA | 2.0 | 1.3 | 2.3 | 1.4 | 1.9 | 1.3 |
yhaZ | 11 | −1.2 | 11 | 1.0 | 11 | 2.3 |
yhaO | 3.9 | 1.0 | 3.0 | −3.2 | 3.2 | −1.2 |
yhaN | 1.6 | −1.1 | 1.5 | −1.2 | 1.3 | 1.5 |
yhaM | 2.0 | 1.0 | 1.7 | 1.0 | 1.9 | 1.2 |
yhjD | 16 | 1.0 | 12 | 1.1 | 7.7 | 2.0 |
yhjC | 2.9 | 1.0 | 1.5 | −1.1 | 1.6 | 1.2 |
yhjB | 3.8 | 1.1 | 1.9 | 1.0 | 1.8 | 1.3 |
xkdA | 3.8 | 1.0 | 3.1 | −1.2 | 2.6 | 1.2 |
recA | 9.4 | 1.2 | 9.1 | 1.0 | 6.7 | 1.7 |
aprX | 2.7 | 1.1 | 1.6 | −1.2 | 1.9 | 1.2 |
ymaCc | 4.0 | 1.4 | 3.6 | 1.1 | 2.5 | 1.6 |
ymaDc | 2.5 | 1.5 | 1.8 | 1.2 | 1.4 | 1.6 |
lexA | 3.4 | −1.6 | 4.1 | 1.0 | 4.4 | 1.6 |
yneA | 37 | 1.0 | 32 | 1.1 | 25 | 2.8 |
yneB | 44 | 1.5 | 9.7 | −1.5 | 12 | 2.8 |
ynzC | 8.1 | 1.2 | 5.6 | −1.1 | 4.3 | 1.9 |
parE | 2.9 | 1.5 | 2.0 | 1.1 | 1.9 | 1.0 |
parC | 3.0 | 1.5 | 2.5 | 1.2 | 2.1 | 1.3 |
yqjW | 3.5 | 1.0 | 2.2 | −1.1 | 2.8 | 1.5 |
yqjX | 5.7 | 1.1 | 4.9 | −1.1 | 4.3 | 1.8 |
yqjY | 1.8 | −1.2 | 1.4 | 1.0 | 1.5 | 1.1 |
yqjZ | 1.9 | −1.2 | 1.3 | −1.2 | 1.5 | −1.1 |
ruvA | 2.2 | 1.1 | 2.2 | 1.1 | 2.1 | 1.5 |
ruvB | 2.2 | 1.1 | 2.0 | 1.1 | 2.2 | 1.5 |
uvrC | 1.6 | 1.1 | 1.7 | 1.1 | 1.6 | 1.0 |
yvsGc | 2.3 | 1.1 | 2.5 | 1.5 | 2.0 | 1.7 |
uvrB | 11 | 1.0 | 7.8 | 1.0 | 6.8 | 1.8 |
uvrA | 12 | 1.0 | 8.8 | 1.0 | 8.3 | 2.0 |
dinC | 175 | 1.2 | 39 | −1.2 | 54 | 4.8 |
licAc | 3.3 | 1.2 | 3.6 | −1.3 | 4.6 | 1.7 |
Genes listed by map position. The first gene in operons is shown in boldface type; subsequent genes in putative multigene operons are shown indented.
Induction levels were determined by microarray analyses as described in Materials and Methods and are given as fold induction in wild-type cells (wt) or recA null mutants relative to untreated cells. UV treatment was performed for 30 min (30′) or 60 min (60′).
This gene does not have a LexA binding site within its promoter region.