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. 2002 Jul;70(7):3336–3343. doi: 10.1128/IAI.70.7.3336-3343.2002

TABLE 1.

List of peptides that allowed generation of long-term CTL lines

Protein Peptide name Sequence and position Binding motif Prediction scorea Expt binding to MHC class Ib
MOMP 7087 67 GDYVFDRI 74 H-2Kb 22 +++
MOMP 7093 319 SLLGNATAL 327 H-2Db 27 +
Pomp5 9165 283 QAVANGGAI 291 H-2Db 25 +++
Omp2 8482 59 RGAFCDKEF 67 H-2Dd 18 ND
Omp2 8511 85 CYGRLYSVKV 94 H-2Kd 18 ND
Hsp60 7233 7 KYNEEARKKI 16 H-2Kd 24 ND
Hsp60 7239 32 GPKGRHVVI 40 H-2Ld 18 ND
Ovalbuminc 7548 257 SIINFEKL 264 H-2Kb 25 +++
β-Galactosidasec 9339 876 TPHPARIGL 884 H-2Ld 25 ND
a

The binding capacity of the peptides was scored according to the presence of anchor amino acids and other amino acids frequently occurring in natural ligands (20).

b

Peptides possessing H-2b-binding anchor residues were tested for the ability to bind to class I molecules in vitro as described in Materials and Methods. ND, not determined; +++, strong stabilization of MHC assembly by peptide; +, stabilization of MHC assembly by peptide.

c

Previously described CTL epitopes of ovalbumin (22) and E. coli β-galactosidase (4) were used as controls.