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. 2025 Dec 12;12(1):11. doi: 10.1038/s41514-025-00314-0

Table 1.

Total number of CpGs per clock and the subset directly overlapping with our sequencing data

Clock Type Total probes Probes present Percent present
PhenoAge Microarray 513 510 99%
Hannum Microarray 71 66 93%
Horvath1 Microarray 353 346 98%
Horvath2 Microarray 391 387 99%
BS-Clock Sequencing 4527 2129 47%

Microarray clocks have a minimum percentage of probe representation of 93%, whilst the Twist panel only has a direct overlap to 47% of the BS-Clock probes.