Table 2.
Four species of poplar statistics of the genome quality for the final assembly.
| Species | P. nigra ‘NL-1976’ nigraHap1 | P. nigra ‘NL-1976’ nigraHap2 | P. nigra ‘NL-1976’ | P. deltoides ‘I-69’ | P. nigra betulifolia L., 1753 | P. trichocarpa Nisqually-1 Trahap1 | P. trichocarpa Nisqually-1 Trahap2 |
|---|---|---|---|---|---|---|---|
| Genome size (Mb) | 385.18 | 390.48 | 389.43 | 424.59 | 414.18 | 391.76 | 397.43 |
| GC content (%) | 33.6 | 33.72 | 33.64 | 33.34 | 35 | 33.86 | 33.91 |
| Number of Gap | 0 | 0 | 0 | 0 | 277 | 6 | 2 |
| N50 (Mb) | 22.31 | 22.05 | 22.04 | 21.51 | 22.49 | 21.8 | 20.9 |
| Maximum scaffold sequence length (bp) | 48,831,123 | 49,313,916 | 48,827,307 | 53,044,917 | 50,570,738 | 52,164,823 | 52,084,038 |
| Minimum scaffold sequence length (bp) | 12,830,606 | 13,255,773 | 6,224,961 | 15,239 | 55,380 | 15,726 | 10,965 |
| Average length (bp) | 20,272,893.4 | 20,551,560.4 | 18,544,479 | 1,608,294.8 | 16,567,390 | 3,211,530.1 | 1,252,100 |
| Complete BUSCOs (%) | 98.7 | 98.8 | 98.7 | 98.6 | 98. 4 | 98.5 | 98.2 |