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. 2005 Oct 31;102(45):16170–16175. doi: 10.1073/pnas.0503733102

Table 1. Kinetic parameters of Diels—Alderase ribozymes.

Clone Class Km1 (diene), μM Km2 (dienophile), μM kcat, s-1 kcat/Km1, M-1 s-1 kcat/Km2, M-1 s-1 kcat/Km1Km2, M-2 s-1 Ki,* μM
49mer 1 200 ± 35 5,200 ± 1,300 0.33 ± 0.06 1,667 64.1 3.2 × 105 11 (IC50)
49mer 1 148 ± 32 3,960 ± 623 0.32 ± 0.11 2,175 81.4 5.5 × 105 31.4 ± 1.8
F12 1 150 ± 32 1,650 ± 197 0.13 ± 0.04 878 79.9 5.3 × 105 29.3 ± 2.4
E12 1§ 86 ± 10 7,890 ± 646 0.05 ± 0.02 583 6.4 7.4 × 104 57.3 ± 2.9
G11 2 396 ± 40 1,310 ± 65 0.01 ± 0.003 25 7.6 1.9 × 104 40.3 ± 9.4
E03 8 213 ± 7 6,150 ± 618 0.11 ± 0.04 504 17.5 8.2 × 104 68.0 ± 2.7
*

Measured with rac4 (Supporting Text) except ‡, where it was measured with the purified R,R-enantiomer of the reaction between 2 and N-pentylmaleimide (29).

As in refs. 29 (IC50) and 33 (all other parameters).

§

Contains A15G change in internal loop sequence compared to 49mer and F12.