Table 1. Kinetic parameters of Diels—Alderase ribozymes.
Clone | Class | Km1 (diene), μM | Km2 (dienophile), μM | kcat, s-1 | kcat/Km1, M-1 s-1 | kcat/Km2, M-1 s-1 | kcat/Km1Km2, M-2 s-1 | Ki,* μM |
---|---|---|---|---|---|---|---|---|
49mer† | 1 | 200 ± 35 | 5,200 ± 1,300 | 0.33 ± 0.06 | 1,667 | 64.1 | 3.2 × 105 | 11 (IC50)‡ |
49mer | 1 | 148 ± 32 | 3,960 ± 623 | 0.32 ± 0.11 | 2,175 | 81.4 | 5.5 × 105 | 31.4 ± 1.8 |
F12 | 1 | 150 ± 32 | 1,650 ± 197 | 0.13 ± 0.04 | 878 | 79.9 | 5.3 × 105 | 29.3 ± 2.4 |
E12 | 1§ | 86 ± 10 | 7,890 ± 646 | 0.05 ± 0.02 | 583 | 6.4 | 7.4 × 104 | 57.3 ± 2.9 |
G11 | 2 | 396 ± 40 | 1,310 ± 65 | 0.01 ± 0.003 | 25 | 7.6 | 1.9 × 104 | 40.3 ± 9.4 |
E03 | 8 | 213 ± 7 | 6,150 ± 618 | 0.11 ± 0.04 | 504 | 17.5 | 8.2 × 104 | 68.0 ± 2.7 |