| AMR | Antimicrobial resistance |
| ARG | Antimicrobial resistance gene |
| TLA | Carbapenemase-producing Enterobacteriaceae |
| CRE | Carbapenem-resistant Enterobacteriaceae |
| ESBL | Extended spectrum β-lactamase |
| FC | Fold change |
| NCGM | National Center for Global Health and Medicine |
| RPKM | reads per kilobase per million mapped reads |
| WBE | wastewater-based epidemiology |
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