| ATAC-Seq | Assay for transposase-accessible chromatin by sequencing |
| CAR-NK | Chimeric antigen receptor natural killer cell |
| CFU | Colony-forming unit |
| CRISPR | Clustered regularly interspaced short palindromic repeats |
| CVD | Cardiovascular disease |
| IAA | Indole-3-acetic acid |
| IgA | Immunoglobulin A |
| IL-22 | Interleukin-22 |
| ILC2s | Group 2 innate lymphoid cells |
| ILC3s | Group 3 innate lymphoid cells |
| IPA | Indole-3-propionic acid |
| LPS | Lipopolysaccharide |
| MASLD | Metabolic dysfunction-associated steatotic liver disease |
| MS | Multiple sclerosis |
| MWAS | Metabolome-wide association study |
| NF-κB | Nuclear factor-kappa B |
| RA | Rheumatoid arthritis |
| SCFAs | Short-chain fatty acids |
| T1D | Type 1 diabetes |
| TH1 | T helper cell 1 |
| TH2 | T helper cell 2 |
| TH17 | T helper cell 17 |
| TLR | Toll-like receptor |
| TMAO | Trimethylamine N-oxide |
| TNF-α | Tumor necrosis factor-alpha |
| UDCA | Ursodeoxycholic acid |
| 3-HPP | 3-(3-hydroxyphenyl) propionic acid |