| AMR | Antimicrobial resistance |
| AMP/AMPs | Antimicrobial peptides |
| ARG/ARGs | Antibiotic resistance gene(s) |
| AUC | Area under the concentration |
| AUC/MIC | Area under the concentration to minimum inhibitory concentration ratio |
| ABC | ATP-binding cassette (efflux family) |
| CRISPR | Clustered regularly interspaced short palindromic repeats |
| Cas | CRISPR-associated protein(s) |
| EPS | Extracellular polymeric substances |
| DNAe | Extracellular DNA |
| ESBL | Extended-spectrum β-lactamase |
| CTX-M/TEM/SHV | ESBL enzyme families |
| EPI/EPIs | Efflux pump inhibitor(s) |
| HGT | Horizontal gene transfer |
| IFN-γ | Interferon gamma |
| IL | Interleukin |
| IL-1β/IL-6/IL-8 | Interleukins 1β, 6, 8 |
| LPS | Lipopolysaccharide |
| LTA | Lipoteichoic acid |
| MDR | Multidrug resistance |
| MFS | Major facilitator superfamily (efflux family) |
| MATE | Multidrug and toxic compound extrusion (efflux family) |
| MGE/MGEs | Mobile genetic element(s) |
| MIC | Minimum inhibitory concentration |
| MLS | Macrolide–lincosamide–streptogramin B |
| MRSA | Methicillin-resistant Staphylococcus aureus |
| CNS | Coagulase-negative staphylococci |
| NF-κB | Nuclear factor kappa B |
| NPs | Nanoparticles |
| PBPs | Penicillin-binding proteins |
| PBP2a | Low-affinity penicillin-binding protein (mecA product) |
| mecA | Methicillin resistance gene |
| blaZ | Staphylococcal β-lactamase gene |
| PD | Pharmacodynamics |
| PK | Pharmacokinetics |
| QRDR | Quinolone resistance–determining region |
| RND | Resistance–nodulation–division (efflux family) |
| AcrAB-TolC | RND tripartite efflux pump system |
| NorA | MFS efflux pump (staphylococci) |
| SMR | Small multidrug resistance (efflux family) |
| T > MIC | Time above the minimum inhibitory concentration |
| TLR | Toll-like receptor |
| TLR2/TLR4 | Toll-like receptor 2/4 |
| TNF-α | Tumor necrosis factor alpha |
| rRNA | Ribosomal ribonucleic acid |
| 23S rRNA | 23S ribosomal RNA |