Table 2.
Differentially expressed genes in Bemisia tabaci MEAM1 fed for 12, 36, and 60 h on healthy (virus free) and tomato yellow leaf curl virus infected plants followed by 12 h of gut clearing on collard. GeneIDs followed by an asterisk were identified as differentially expressed in both analyses.
| GeneID | Time point (h) | Annotation | Fold Change | Adjusted P-value |
|---|---|---|---|---|
| Read Mapping | ||||
| Bta09316 | 24 | None | 1.23 | 0.087 |
| Bta05759* | 48 | Unknown protein | 1.46 | 0.039 |
| Bta05741* | 72 | Unknown protein | 1.91 | 0.000 |
| Bta15312 | 72 | Reverse transcriptase | −4.05 | 0.000 |
| Bta13457 | 72 | Unknown protein | 1.66 | 0.001 |
| Bta06687 | 72 | Unknown protein | 2.88 | 0.002 |
| Bta01272 | 72 | Histone H2A | −1.54 | 0.006 |
| Bta13864 | 72 | Unknown protein | 2.30 | 0.009 |
| Bta13103 | 72 | rRNA N-glycosidase | 1.44 | 0.014 |
| Bta13961 | 72 | Thaumatin-like protein 1a | 1.72 | 0.014 |
| Bta02118 | 72 | Glucosylceramidase | 1.49 | 0.069 |
| Bta05685 | 72 | Unknown protein | 2.63 | 0.069 |
| Bta02612 | 72 | Protein kinase C | −1.29 | 0.098 |
| Transcript Quantification | ||||
| Bta14861 | 24 | D-alanine–poly(phosphoribitol) ligase subunit 1 | −1.51 | 0.008 |
| Bta04330 | 24 | Unknown protein | −1.25 | 0.094 |
| Bta03745 | 48 | G/T mismatch-specific thymine DNA glycosylase | −1.23 | 0.041 |
| Bta14135 | 48 | ADP-ribosylation factor family | −1.24 | 0.041 |
| Bta05213 | 48 | Histone H2B | 1.24 | 0.048 |
| Bta05759* | 48 | Unknown protein | 1.37 | 0.048 |
| Bta07538 | 48 | Cyclin-A1 | −1.21 | 0.048 |
| Bta08644 | 48 | PAX-interacting protein | −1.25 | 0.048 |
| Bta01987 | 48 | Cytochrome c oxidase subunit 1 | −0.77 | 0.049 |
| Bta00576 | 48 | Ubiquitin carboxyl-terminal hydrolase | −1.20 | 0.060 |
| Bta08449 | 48 | Ribosomal protein L30 | −0.80 | 0.060 |
| Bta00412 | 48 | Double-stranded RNA-specific editase 1 | −1.16 | 0.078 |
| Bta02155 | 48 | Histone H2B | 1.20 | 0.078 |
| Bta12553 | 48 | Kinetochore protein NDC80-like protein | −1.28 | 0.078 |
| Bta13581 | 48 | Mastermind | −1.25 | 0.078 |
| Bta02342 | 48 | Peptidyl-prolyl cis-trans isomerase | 1.30 | 0.081 |
| Bta00196 | 48 | CTAGE family member 5 | −1.20 | 0.085 |
| Bta03026 | 48 | 30S ribosomal protein S8 | −1.21 | 0.086 |
| Bta03449 | 48 | Solute carrier family 35 member E1-like protein | −1.29 | 0.086 |
| Bta11294 | 48 | E3 ubiquitin-protein ligase TRIM37 | −1.27 | 0.086 |
| Bta12260 | 48 | 40S ribosomal protein S24 | 1.26 | 0.086 |
| Bta13866 | 48 | NADH dehydrogenase flavoprotein 1 | 1.25 | 0.089 |
| Bta02577 | 48 | E3 ubiquitin-protein ligase RNF139 | −1.24 | 0.098 |
| Bta05741* | 72 | Unknown protein | 1.91 | 0.000 |
| Bta13457 | 72 | Unknown protein | 1.94 | 0.001 |
| Bta13640 | 72 | Chemosensory protein | 1.86 | 0.002 |