Microsatellite mutation | Alleles are called correctly but there is a size shift of 1–2 bp (in the LMSV2 data) or 1–4 bp (in the FMS data), depending on repeat type |
Priming-site mutation | An individual is missing an allele from one of the parents or has inherited a “null” (nonamplifying) allele from a parent |
Missed allele | An allele in the genotype is missed during calling |
Sample swap | Sample is incorrectly labeled |
Call error | Allele is incorrectly assigned |