TABLE 3.

Putative transposases in the genome of Exiguobacterium sp. strain 255-15

IS family	Gene IDa	Homology groupb	G+C content (mol%)	Length		Product
				bp	aac
IS605/IS200	0823*, 0073, 0095, 0413, 0502	I (77.3-90.5)	49.19-51.66	1,173	390	IS605 orfB
	0603	I (77.3-90.5)	50.13	1,167	388	IS605 orfB
	1900	I (77.3-90.5)	49.47	750	249	IS605 orfB
	1938*, 0398, 0692, 2634, 0883, 0012	II (83.8-97.5)	45.69-48.14	1,101	366	IS605 orfB
	1122	II (83.8-97.5)	46.18	747	248	IS605 orfB
	0987	II (83.8-97.5)	44.97	696	231	IS605 orfB
	0988	II (83.8-97.5)	44.92	492	163	IS605 orfB
	1018*	III (NA)	45.22	1,077	358	IS605 orfB
	1017*	IV (NA)	42.79	402	133	IS200
	0882*, 0011	V (98.0-100.0)	44.86, 45.61	399	132	IS200
IS30	0411*, 2662, 2492, 2494, 1905, 0995, 1141, 0829, 0075, 2913	VI (99.0-100.0)	47.18-47.5	939	312	IS30
	0571	VI (99.0-100.0)	47.39	942	313	IS30
	2910	VI (99.0-100.0)	46.51	387	128	IS658
IS3	0173*, 0791, 2226, 1202, 1265	VII (86.1-99.7)	43.51-46.76	678	225	IS3, orfA
	0174*, 0614	VIII (83.8-100.0)	45.78-45.87	750	249	IS3, orfB
	1203, 1266	VIII (83.8-100.0)	45.78-46.2	723	240	IS3, orfB
	2227	VIII (83.8-100.0)	47.59	435	144	IS3, orfB
	2228	VIII (83.8-100.0)	44.44	342	113	IS3, orfB
ISNCY	1723*	IX (99.8-100.0)	46.51	516	172	CREd
	1032	IX (99.8-100.0)	46.35	561	187	CRE
	2917	IX (99.8-100.0)	46.96	939	312	CRE
	0657	IX (99.8-100.0)	46.78	1,584	527	CRE

^aORFs used to construct probes are indicated by asterisks. ID, identification number.

^bThe percent identity between transposase coding nucleotide sequences inside the group is shown in parentheses. ORFs chosen for probe design had more than 82% identity to other ORFs inside the group. NA, not applicable (ORFs are unique and have 20.6 to 26.0% [ORF1018], and 20.9 to 25.9% [ORF1017] identity to others).

^caa, amino acids.

^dCRE, cassette chromosome recombinase.