TABLE 2.
Primers used for 16S rRNA gene amplification and sequencing
| Primer use and name | Primer sequence (5′-3′) | Reference or source |
|---|---|---|
| Amplification | ||
| F11 (F) | TACCAGTTGGAAACGACTGT | 4 |
| F5 (R) | CCTTTTTGAGTTTCGCTCC | 4 |
| 63F | CAGGCCTAACACATGCAAGTC | 6 |
| 1387R | GGGCGGWGTGTACAAGGCa | 6 |
| Sequencing | ||
| 101F | ACTGGCGGACGGGTGAGTAA | 12 |
| 537R | CGTATTACCGCGGCTGCTGG | 12 |
| 519F | CAGCAGCCGCGGTAATAC | 13 |
| 926R | CCGTCAATTCCTTTGAGTTT | 13 |
| 327F | CTACGGGAGGCAGCAGTGGGGAATA | This study |
| 727F | ACCGATACTGACACTGAGGGACGAA | This study |
| 949F | CGATGCAACGCGAAGAACCT | This study |
a
W, bases T, U, or A.