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. 2005 Nov;71(11):6926–6933. doi: 10.1128/AEM.71.11.6926-6933.2005

TABLE 1.

PCR primer sequences, targets, annealing temperatures, and amplicon lengths

Primer Class targeted Primer sequence (5′→3′) Primer annealing temp (°C)c Amplicon size (bp) Reference
tetAC-150fa Tet A, C GCT RTA TGC GTT GRT GCA AT 58 567 This study
tetAC-716ra Tet A, C TCC TCG CCG AAA ATG ACC
tetG-247fb Tet G GTC GAT TAC ACG ATT ATG GC 57 432 This study
tetG-678rb Tet G CAC TTG GCC GAT CAG TTG A
Ribo2-FW Tet M, O, P, Q, S, T, W GGM CAY RTG GAT TTY WTI GC 52 1,315 5
Ribo2-RV Tet M, O, P, Q, S, T, W TCI GMI GGI GTR CTI RCI GGR C
a

Numbered according to the tet(A) gene in plasmid pRP1 in E. coli (GenBank accession no. X00006).

b

Numbered based on the tet(G) gene in plasmid pSTG1 in a Pseudomonas sp. (GenBank accession no. AF133139).

c

For touchdown PCR. See the text for details.