TABLE 3.
Results of screening for presence of haloalkane dehalogenase genes dmbA, dmbB, and dhmA in mycobacterial isolates
| Isolatea | Country | Hostd | dmbA | dmbB | dhmA |
|---|---|---|---|---|---|
| M. tuberculosis Beijing M434 | Type strain | + | + | − | |
| M. tuberculosis Beijing 02A0110 | Germany | Human | + | + | − |
| M. bovis 12/996 | Czech Republic | Cattle | + | + | − |
| M. bovis 13/2 | Czech Republic | Cattle | + | + | − |
| M. bovis CAMP2063-B | Czech Republic | Cattle | + | + | − |
| M. bovis CAMP5032/66 | Czech Republic | Cattle | + | + | − |
| M. bovis CAMP5032/69 | Czech Republic | Cattle | + | + | − |
| M. bovis CAMP5032/81 | Czech Republic | Cattle | + | + | − |
| M. bovis CAMP5033/66 | Czech Republic | Human | + | + | − |
| M. bovis CAMP5033/81 | Czech Republic | Human | + | + | − |
| M. bovis CAMP5120/74 | Czech Republic | Cattle | + | + | − |
| M. bovis CAMP5120/79 | Czech Republic | Cattle | + | + | − |
| M. bovis CAMP5120/81 | Czech Republic | Cattle | + | + | − |
| M. bovis TBC 4/58 | France | Guinea pig | + | + | − |
| M. bovis BCG25/80 | Argentina | Vaccine strain | + | + | − |
| M. bovis BCG19 | Australia | Vaccine strain | + | + | − |
| M. bovis BCG31/75 | Brazil | Vaccine strain | + | + | − |
| M. bovis BCG7/80 | Czech Republic | Vaccine strain | + | + | − |
| M. bovis BCG MB3/97* | Czech Republic | Child | + | + | − |
| M. bovis BCG MB2/97* | Czech Republic | Child | + | + | − |
| M. bovis BCG MBT/98* | Czech Republic | Child | + | + | − |
| M. bovis BCGR1/89* | Czech Republic | Child | + | + | − |
| M. bovis BCG5 | France | Vaccine strain | + | + | − |
| M. bovis BCG1/83 | Japan | Vaccine strain | + | + | − |
| M. bovis BCG28 | Norway | Vaccine strain | + | + | − |
| M. bovis B/2000 | Poland | European bison | + | + | − |
| M. bovis RUS | Slovakia | Cattle | + | + | − |
| M. bovis BCG15/80 | Sweden | Vaccine strain | + | + | − |
| M. bovis BCG | Russia | Vaccine strain | + | + | − |
| M. africanum 00A0312 | Germany | Human | + | + | − |
| M. africanum 00A0743 | Germany | Human | + | + | − |
| M. africanum 01A0228 | Germany | Human | + | + | − |
| M. africanum 01A0382 | Germany | Human | + | + | − |
| M. africanum 01A0230 | Germany | Cattle | + | + | − |
| M. caprae 14/380 | Czech Republic | Cattle | + | + | − |
| M. caprae D103/99 | Czech Republic | Human | + | + | − |
| M. caprae T158 | Czech Republic | Red deer | + | + | − |
| M. caprae 00A0317 | Germany | Cattle | + | + | − |
| M. caprae 01A0226 | Germany | Human | + | + | − |
| M. caprae M412 | Germany | Cattle | + | + | − |
| M. caprae M353 | Germany | Cattle | + | + | − |
| M. caprae HU10 | Hungary | Wild boar | + | + | − |
| M. caprae HU12 | Hungary | Cattle | + | + | − |
| M. microti 02A0953 | Germany | Fox | + | + | − |
| M. microti M432 | Germany | Coati | + | + | − |
| M. pinnipedii 01A1295 | Germany | Seal | + | + | − |
| M. pinnipedii 02A0460 | Germany | Camel | + | + | − |
| M. pinnipedii 02A0461 | Germany | Camel | + | + | − |
| M. avium subsp. avium 20/588 | Czech Republic | Pig (lymph node) | − | − | + |
| M. avium subsp. avium 20/685 | Czech Republic | Pig (mesenteric lymph node) | − | − | + |
| M. avium subsp. avium 21/320 | Czech Republic | Peregrine falcon (liver) | − | − | + |
| M. avium subsp. avium 21/345 | Czech Republic | Nutria (liver) | − | − | + |
| M. avium subsp. avium 21/383 | Czech Republic | Goldeneye (liver) | − | − | + |
| M. avium subsp. avium N32/97 | Czech Republic | Cattle (bull, mesenteric lymph node) | − | − | + |
| M. avium subsp. avium N52/97 | Czech Republic | Pig (submandibular lymph node) | − | − | + |
| M. avium subsp. avium N61/97 | Czech Republic | Pig (submandibular lymph node) | − | − | + |
| M. avium subsp. avium N65/99 | Czech Republic | Cattle (bull, mesenteric lymph node) | − | − | + |
| M. avium subsp. avium N77/96 | Czech Republic | Cattle (cow, mesenteric lymph node) | − | − | + |
| M. avium subsp. avium N90/96 | Czech Republic | Cattle (cow, mesenteric lymph node) | − | − | + |
| M. avium subsp. avium N141/97 | Czech Republic | Cattle (bull, mesenteric lymph node) | − | − | + |
| M. avium subsp. avium N216/96 | Czech Republic | Cattle (bull, mesenteric lymph node) | − | − | + |
| M. avium subsp. avium N258/96 | Czech Republic | Cattle (heifer, mesenteric lymph node) | − | − | + |
| M. avium subsp. avium N433/96 | Czech Republic | Cattle (cow, mesenteric lymph node) | − | − | + |
| M. avium subsp. avium N285/96 | Czech Republic | Cattle (bull, mesenteric lymph node) | − | − | + |
| M. avium subsp. avium 15367 | The Netherlands | Human (sputum) | − | − | + |
| M. avium subsp. avium 9501279 | The Netherlands | Pig (not known) | − | − | + |
| M. avium subsp. hominissuis N2/97 | Czech Republic | Pig (submandibular lymph node) | − | − | + |
| M. avium subsp. hominissuis N100/97 | Czech Republic | Pig (submandibular lymph node) | − | − | + |
| M. avium subsp. paratuberculosis 58 | Czech Republic | Cattle (cow, feces) | − | − | + |
| M. avium subsp. paratuberculosis 666 | Czech Republic | Cattle (cow, feces) | − | − | + |
| M. avium subsp. paratuberculosis 2108 | Denmark | Cattle (cow, feces) | − | − | + |
| M. avium subsp. paratuberculosis 4898 | Denmark | Cattle (cow, feces) | − | − | + |
| M. avium subsp. paratuberculosis 4901 | Denmark | Cattle (cow, feces) | − | − | + |
| M. avium subsp. paratuberculosis 4904 | Denmark | Cattle (cow, feces) | − | − | + |
| M. avium subsp. paratuberculosis 5388 | Denmark | Cattle (cow, feces) | − | − | + |
| M. avium subsp. paratuberculosis 5394 | Denmark | Cattle (cow, feces) | − | − | + |
| M. avium subsp. paratuberculosis 5403 | Denmark | Cattle (cow, feces) | − | − | + |
| M. avium subsp. paratuberculosis 5418 | Denmark | Cattle (cow, feces) | − | − | + |
| M. avium subsp. paratuberculosis 5429 | Denmark | Cattle (cow, feces) | − | − | + |
| M. avium subsp. paratuberculosis 5452 | Denmark | Cattle (cow, feces) | − | − | + |
| M. avium subsp. paratuberculosis 5457 | Denmark | Cattle (cow, feces) | − | − | + |
| M. avium subsp. paratuberculosis 5469 | Denmark | Cattle (cow, feces) | − | − | + |
| M. avium subsp. paratuberculosis 5474 | Denmark | Cattle (cow, feces) | − | − | + |
| M. avium subsp. paratuberculosis 5476 | Denmark | Cattle (cow, feces) | − | − | + |
| M. avium subsp. paratuberculosis 5533 | Denmark | Hamster (male, feces)b | − | − | + |
| M. avium subsp. paratuberculosis 5947 | Denmark | Hamster (male, feces)c | − | − | + |
| M. avium subsp. paratuberculosis 6371 | Denmark | Cattle (cow, feces) | − | − | + |
| M. avium subsp. paratuberculosis 6420 | Denmark | Cattle (cow, feces) | − | − | + |
| M. avium subsp. paratuberculosis 6423 | Denmark | Cattle (cow, feces) | − | − | + |
| M. avium subsp. paratuberculosis 6477 | Denmark | Cattle (cow, feces) | − | − | + |
| M. avium subsp. paratuberculosis 6564 | Denmark | Cattle (cow, feces) | − | − | + |
| M. avium subsp. paratuberculosis 6567 | Denmark | Cattle (cow, feces) | − | − | + |
| M. avium subsp. paratuberculosis 6577 | Denmark | Cattle (cow, feces) | − | − | + |
| M. avium subsp. paratuberculosis 6706 | Denmark | Cattle (cow, feces) | − | − | + |
| M. avium subsp. paratuberculosis 6732 | Denmark | Cattle (cow, feces) | − | − | + |
| M. avium subsp. paratuberculosis 6775 | Denmark | Cattle (cow, feces) | − | − | + |
| M. avium subsp. paratuberculosis 7747 | Denmark | Cattle (cow, feces) | − | − | + |
| M. avium subsp. paratuberculosis 7749 | Denmark | Cattle (cow, feces) | − | − | + |
| M. avium subsp. paratuberculosis 7840 | Denmark | Cattle (cow, feces) | − | − | + |
| M. avium subsp. paratuberculosis 1766 | Finland | Cattle (cow, feces) | − | − | + |
| M. avium subsp. paratuberculosis 1871 | Finland | Cattle (cow, feces) | − | − | + |
| M. avium subsp. paratuberculosis 1938 | Finland | Cattle (cow, feces) | − | − | + |
| M. avium subsp. paratuberculosis 2109 | Finland | Cattle (cow, feces) | − | − | + |
| M. avium subsp. paratuberculosis 2169 | Finland | Cattle (cow, feces) | − | − | + |
a
*, Knee joint postvaccination complications.
b
Hamster feces 81 days after infection. The hamster was infected with strains isolated from imported cattle from Denmark.
c
Hamster feces 105 days after infection. The hamster was infected with strains isolated from imported cattle from Denmark.
d
Host genus and species names for cattle, human (child), bison, boar, guinea pig, red deer, fox, coati, seal, camel, pig A, pig B, peregrine falcon, nutria, goldeneye, and hamster were, respectively, Bos taurus, Homo sapiens, Bison bonasus, Sus scrofa, Cavia aperea, Cervus elaphus, Vulpes vulpes, Nasua rufa, Phoca vitulina, Camelus ferus, Egretta garzetta, Sus scrofa f. domestica, Falco peregrinus, Myocastor coypus, Bucephala clangula, and Mesocricetus auratus.