Table 8.
Comparison of Nonparametric and Parametric Regressions, for Two QTLs, in the Presence of Epistasis and with 100 Sib Pairs[Note]
Percentagea of |
|||
Type of Identification (First QTL/Second QTL) | NP | P1 | P2 |
No dominance effect at either QTLb: | |||
Correct/correct | 91.4 | 94.5 | 95.6 |
Correct/incorrect | 8.6 | 5.5 | 4.4 |
Incorrect/correct | 0 | 0 | 0 |
Incorrect/Incorrect | 0 | 0 | 0 |
Dominance effect at the first QTLc: | |||
Correct/correct | 78.1 | 60.8 | 64.8 |
Correct/incorrect | 6.5 | 3.3 | 4.9 |
Incorrect/correct | 12.3 | 26.4 | 23.0 |
Incorrect/incorrect | 3.1 | 9.5 | 7.3 |
Note.—Simulation parameter values were α=5, σ2=1, Δ=1, and θ1=θ2=θ3=θ4=θ5=.01, and there were 1,000 replications.
Definitions of abbreviations are the same as those given in table 1.
Trait variance of 80% was explained by the first QTL.
Trait variance of 60% was explained by the first QTL.