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. 2000 Jan 6;66(1):251–261. doi: 10.1086/302707

Table 2.

Examples Illustrating Effects of the Conditional Independence Assumption on Estimates and on Fit of Model 2 When Exposure Has No Effect on Risk[Note]

When ConditionalIndependence Holds
When Child'sGenotype ModifiesProbability of Exposurea
ParentalMating Typeand No. ofCopies ofVariantAllele inOffspring E = 1 E = 0 E = 1 E = 0
Approximate Expected Count
(1,2):
 2 25 30 49 6
 1 25 30 31 24
(1,1):
 2 15 25 34 6
 1 30 49 41 38
 0 15 25 15 25
(0,1):
 1 49 126 79 96
 0 49
126
49
126
Estimated R1
1.00
1.00
1.55
0.76
Estimated R2
1.00
1.00
2.47
0.22
P Value for Test of Genotype-Exposure Interactionb
1.00
10−9
P Value for Test of Fitc
1.00 .99

Note.— Illustrative data are approximate expected counts if a random sample of 1,000 case-parent triads were taken from the structured population described in the text.

a

Description of dependence in text.

b

2-df LRT of H012=0 in model 2.

c

4-df LRT of fit to model 2.