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. 2000 Jan 7;66(1):69–83. doi: 10.1086/302699

Table 1.

Sequence Variants Used to Define Haplotypes in the LPL Locus. From Nickerson et al. (1998).

Sitea Positionb Variantc
1 106 C→A
2 110 A→C
3 145 G→A
4 325 T→C
5 343 (TG)3→(TG)4
6 479 T→C
7 551 (A)3→(A)2
8 736 T→C
9 1216 C→G
10 1220 T→C
11 1286 C→T
12 1547 A→C
13 1571 C→G
14 1828 C→G
15 1939 A→G
16 2131 C→T
17 2500 G→A
18 2619 A→G
19 2987 T→G
20 2996 C→A
21 3022 G→A
22 3248 C→G
23 3290 (T)7→(T)8
24 3297 (A)4→(A)5
25 3609 T→C
26 3723 T→C
27 3843 G→A
28 4016 C→G
29 4343 A→T
30 4346 C→G
31 4418 C→T
32 4426 T→C
33 4509 T→C
34 4576 A→T
35 4872 G→A
36 4935 T→C
37 5085 G→A
38 5168 T→C
39 5395 (A)8→(A)9
40 5441 T→C
41 5554 A→C
42 5560 A→G
43 5687 T→C
44 6250 C→T
45 6595 G→C
46 6678 T→G
47 6718 A→G
48 6772 A→G
49 6863 C→T
50 6939 delAAAT
51 7315 G→C
52 7344 A→G
53 7360 A→G
54 7413 T→C
55 7754 A→C
56 8088 insAG
57 8089 G→T
58 8285 C→G
59 8292 A→C
60 8393 T→G
61 8533 A→C
62 8537 A→C
63 8538 (A)3→(A)2
64 8644 T→C
65 8755 G→A
66 8852 T→G
67 9402 A→G
68 9712 G→A
69 9721 G→A
a

Site number assigned to each variable character used to define haplotypes in order, 5′ to 3′.

b

Position in the baseline sequence (Genbank accession number AF050163).

c

Substitution and insertion/deletion variants are reported as the state in the baseline sequence → alternative state.