Table 1.
PCR primers used to generate ITGB2 cDNA or genomic specific DNA fragments. Nucleotide numbering is according to position + 1 being the first nucleotide of the initiation codon ATG in the normal CD18 cDNA sequence. 5′UTR = 5′ untranslated region.
Primer Sequence | Nucleotide position | Fragment Amplified | Size of the PCR Product | |
1 | S: 5′CTACTCCATGCTTGATGACCTA 3′ | 402-423 | CD18 extracellular | 1.6 kb |
R: 5′CATCCACATAGATGAAGGTAGCG 3′ | 1973-1995 | coding region | ||
2 | S: 5′GAGGAAATCGGCTGGCGAAC 3′ | 742-761 | Exon 7 | 156 bp |
R: 5′ATGTTCGCTCGTTCCTTAAG 3′ | 877-896 | |||
3 | S: 5′TGTGACACTGGCTACATTGGGA 3′ | 1412-1433 | Exon 12 | 245 bp |
R: 5′AGACCTGGCCGTTGTAGCGC 3′ | 1636-1655 | |||
4 | S: 5′GGAGGGGGCTCTGCTTCTG 3′ | 1658-1676 | Exon 13 | 220 bp |
R: 5′ATGTACTTGCCACAGGGTGAG 3′ | 1858-1877 | |||
5 | S: 5′CTCCTGCGCCGACTGCCT 3′ | 1879-1896 | Exon 14 | 220 bp |
R: 5′CTCGGCTCTCATCCACATAG 3′ | 2079-2098 | |||
6 | S: 5′ACAGAGTGCATCCAGGAGCA 3′ | 1252-1271 | Exon 11 | 147 bp |
R: 5′CTCCAAGAAGCCCTTGCCAT 3′ | 1378-1397 | |||
7 | S: 5′GAGTCCTTGCTCTGAAGATGACT 3′ | −834,−812 | CD18 | 1.1 kb |
R: 5′TGCTCTTGGTGGCAGGCACT 3′ | 230-249 | 5′UTR | ||