TABLE 1.
List of plasmids and strains
| Strain or plasmid | Relevant characteristic or genotype | Reference |
|---|---|---|
| Plasmids | ||
| pBR322 | E. coli plasmid cloning vector | 2 |
| pMUTIN2 | B. subtilis integration plasmid for gene inactivation | 33 |
| pDG1728 | B. subtilis plasmid for ectopic integration of lacZ transcriptional fusions at amyE | 10 |
| pEpUCΔ1 | E. coli-B. subtilis shuttle vector to generate in-frame mutations | 31 |
| pTH1 | Internal 348-bp fragment of thiL (ydiA) cloned into pMUTIN2 | This work |
| pTH12 | 712-bp thiC promoter fragment cloned into pDG1728 | This work |
| pTH30 | In-frame ΔthiL (ydiA) deletion (G79-G202) cloned into pEpUCΔ1 | This work |
| pTH31 | Internal 353-bp yuaJ fragment cloned into pMUTIN2 | This work |
| Strains | ||
| B. subtilis | ||
| PY79 | SPβc (cured) prototroph | BGSC (1A747) |
| TH12 | SPβc ΔthiL::cat4 | This work |
| TH21 | SPβc ΩamyE::thiC-lacZ | This work |
| TH22 | SPβc ΔthiL::cat4 ΩamyE::thiC-lacZ | This work |
| TH48 | ΔthiL::cat4 yuaJ (the first lesion in Tx26) ykoD (the second lesion in Tx26) | This work |
| TH76 | ΩyuaJ::pMUTIN2 | This work |
| TH83 | ΔthiL yuaJ ykoD | This work |
| TH95 | ΔthiL thiN (tx1) yuaJ ykoD ΩyloA::Tn917 | This work |
| TH105 | ΔthiL::cat4 | This work |
| TH106 | ΔthiL::cat4Ω thiL::pMUTIN2 | This work |
| TH112 | ΔthiL::cat4 ΩamyE::thiC-lacZ ykoD ΩyufR::Tn917 | This work |
| TH128 | ΔispA::neo | This work |
| TH137 | ΩyuaJ::pMUTIN2 ΔykoD::cat4 | This work |
| TH138 | ΔykoD::cat4 | This work |
| 1A603 | (SPβc2) trpC2 ΩthiC84::Tn917 | 34 |
| 1A631 | (SPβc2) trpC2 ΩmotA::Tn917 | 34 |
| 1A633 | (SPβc2) trpC2 ΩyloA::Tn917 | 34 |
| 1A642 | (SPβc2) trpC2 ΩyufR::Tn917 | 34 |
| Tx1 | ΔthiL::cat4 ΩamyE::thiC-lacZ thiN (tx1) | This work |
| Tx26 | ΔthiL::cat4 ΩamyE::thiC-lacZ yuaJ ykoD | This work |
| RL2066 | ΔspoVM::spec | 5 |
| E. coli | ||
| PT-R1 | thiO-35 | E. coli Genetic Stock Center; 13 |
| K12 | Wild type | E. coli Genetic Stock Center |
| S. enterica serovar Typhimurium | ||
| DM456 | ΩthiD906::MudJ(Km) | 37 |
| DM1856 | ΩthiL934::Tn10d(Tc) | 28 |